Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2656g00019 ATGGGTATTCTTTGCTTCCTGATTATCGCTGCTTATTTACTCCCTTCCTTCTCAGTTTCAGTAGCAGTAGATTCCATTGCTCCGACCCAGTTCATAAGAGATGGCATGACCTTAGTTTCTCAAGGTGGAGACTTTGAACTTGGTTTCTTCAGTCCTGGACAATCAAAGAAACGCTACCTTGGTATTTGGTACAAGAATGTCCCAATTCAGACAGTAGTTTGGGTTGCAAACAGAATAAACCCAATCAACGGTTCATCAGGTATTCTAACATTAAACACCAGCGGCAACCTTGTCCTGCGCCAAAATGACACTGTCGTTTGGCAGGCAAACTCAGAGAAAACAGCACGTAATCCAGTGGTGCAGCTCTTGGATTCTGGCAATCTGGTATTGAGAGAGGAAAACGAAGCAAATTCAGAAAATTATTTGTGGCAGAGCTTTGACTTTCCGTCGGATACATTAATGCCAGGTATGAAATTTGGATATAACCTGAAGAAAGGAAAGAACTGGACTCTCACAGCTTGGACGAGTCCAGATGATCCCGCTCCAGGAGACTTCTCTTGCGTTACAGATACCCATAACTATCCAGATTCTGCACTAATGAGAGGAGATAAGGTTTATAGCAGATTTGGACCCTGGAATGGTCTCCACACAAGTGGCTCACCGGACGTGAAGCCCAACCCTGTTTATTACTTCAAATTCATCTACAATAAGGAAGAGATCTCCTACACATACTATCTGACAAACAGTTCTGTATATTCAAGGATAGTAATGAACCAAACGGATTACATTCGGTATCGATATGTGTGGGTGGAAGCTAATCAAAACTGGATGGTTTATAAATCAAAGCCAGTAGACTACTGTGACCATTATGGTTTGTGTGGAGCCAATGGGAACTGTATCATCACTGAGTCACCAGTTTGTCAGTGCTTAAAAGGGTTCAATCCTAAGTCACCACAGGCGTGGAATTCCATGGATTGGTCTGCTGGGTGTGTCCGAAATGAACCTCTGAATTGCTCTGAGGATGGTTTTATCAAATTGCAAGGATTGAAAGTGCCAGATACAACCCATACTTGGCTTGATGAGACAATGGCCTTAGAGGAATGTAGACAGAGATGCTTGAATAATTGTTCTTGCACGGCCTTCACAAATTCAGATGTAAGAGGACAAGGGAGTGGGTGTGCCATGTGGTTTGGTAATCTTATGGACATCAGACAGTTTGCTTCTGGAGGACAGGATCTGTATGTGCGAATGGCTGCTTCAGAATTAGGGATGCTTCTAGTTGGATGTTACTTTATTTGCAATGTCCGCAGAAAGATGACTGATAAAGCAAAAGTCAAAGAAGAAGATCAACACAGTGAAGGATCTGAAGATGATGCAGACCTCACTTTGCTTGACCTGCCCACGATAGCTGATGCCACTGACAACTTTTCGTTGGAGAACAAAATTGGACAAGGTGGATTTGGAACTGTATATAAGGGAAAATTAGTGAATGGGAAATTAATTGCAGTAAAGAGACTCTCTATGAGCTCAAGACAGGGATTAATTGAATTCAAGAATGAAGTGAGACTAATTGCAAGACTTCAACACCGAAATCTTGTAAAACTTCTTGGTTGCTGCCTTCAAGGACAAGAGAAAATGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGAACTCCTTTATTTTTGATGAAAATCGAGGTAAGTTGCTGGATTGGCCAAAACGTTTTAACATAACTTGCAGCATTGCTCGAGGTCTCATGTATCTTCATCAAGATTCAAGATTGAGAATTATTCATAGAGATTTAAAGGCAAGTAATATTTTACTTGATGAGAAGTTGAATCCAAAGATATCAGATTTTGGCATGGCTAAAACCTTTGGTGGAGAGCAAATAGAAGGCAATACAAATAGAGTAGTGGGTACCTATGGTTACATGGCACCTGAGTATGCAGCGGACGGATTATTCTCAACAAAATCTGATGTGTTCAGCTTTGGTATTCTGGTAATGGAAATTATATATGGGAAGAGAAACAGAGGGTTCTATAATGCAGACCGTTCTCATAACCTCATATGTCATGCATGGTTGCTGTGGAAAGAAGGGAGGGCTCTAGAACTGATAGACAGAAACATAGAGGAGACATACGTTGTATCAGAAATAATGAGATGCATCCACATTAGTCTTCTGTGTGTGCAACAGCATCCTGAAGACAGACCCAGCATGTCTTCTGTTGTTTTGATGTTGGGGAGTGAGAATGAGTTGAATGAGCCTAAACAACCTGGTTTCTTTACGGGGAAGGCTACATCAGAAGCAAGTTCATCATCAAGTCATCAAATGCAGTCTGGTTCAACTAATGAAATAACACTCACCTTACTAGAGGCTCGGTGA 2385 0.4143 MGILCFLIIAAYLLPSFSVSVAVDSIAPTQFIRDGMTLVSQGGDFELGFFSPGQSKKRYLGIWYKNVPIQTVVWVANRINPINGSSGILTLNTSGNLVLRQNDTVVWQANSEKTARNPVVQLLDSGNLVLREENEANSENYLWQSFDFPSDTLMPGMKFGYNLKKGKNWTLTAWTSPDDPAPGDFSCVTDTHNYPDSALMRGDKVYSRFGPWNGLHTSGSPDVKPNPVYYFKFIYNKEEISYTYYLTNSSVYSRIVMNQTDYIRYRYVWVEANQNWMVYKSKPVDYCDHYGLCGANGNCIITESPVCQCLKGFNPKSPQAWNSMDWSAGCVRNEPLNCSEDGFIKLQGLKVPDTTHTWLDETMALEECRQRCLNNCSCTAFTNSDVRGQGSGCAMWFGNLMDIRQFASGGQDLYVRMAASELGMLLVGCYFICNVRRKMTDKAKVKEEDQHSEGSEDDADLTLLDLPTIADATDNFSLENKIGQGGFGTVYKGKLVNGKLIAVKRLSMSSRQGLIEFKNEVRLIARLQHRNLVKLLGCCLQGQEKMLVYEYMPNGSLNSFIFDENRGKLLDWPKRFNITCSIARGLMYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFGMAKTFGGEQIEGNTNRVVGTYGYMAPEYAADGLFSTKSDVFSFGILVMEIIYGKRNRGFYNADRSHNLICHAWLLWKEGRALELIDRNIEETYVVSEIMRCIHISLLCVQQHPEDRPSMSSVVLMLGSENELNEPKQPGFFTGKATSEASSSSSHQMQSGSTNEITLTLLEAR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2656g00019 794 SMART ntp_6 338 417 IPR003609 -
Pral2656g00019 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 146 - -
Pral2656g00019 794 SUPERFAMILY Protein kinase-like (PK-like) 462 763 IPR011009 -
Pral2656g00019 794 CDD B_lectin 29 149 IPR001480 -
Pral2656g00019 794 CDD STKc_IRAK 482 747 - -
Pral2656g00019 794 MobiDBLite consensus disorder prediction 764 794 - -
Pral2656g00019 794 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 738 - -
Pral2656g00019 794 CDD PAN_AP_plant 335 418 - -
Pral2656g00019 794 Pfam Domain of unknown function (DUF3403) 751 794 IPR021820 GO:0004674
Pral2656g00019 794 Gene3D - 18 146 IPR036426 -
Pral2656g00019 794 Gene3D Hepatocyte Growth Factor 336 415 - -
Pral2656g00019 794 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Pral2656g00019 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 552 755 - -
Pral2656g00019 794 Gene3D Transferase(Phosphotransferase) domain 1 552 760 - -
Pral2656g00019 794 Pfam Protein tyrosine and serine/threonine kinase 477 745 IPR001245 GO:0004672|GO:0006468
Pral2656g00019 794 ProSitePatterns Protein kinases ATP-binding region signature. 482 504 IPR017441 GO:0005524
Pral2656g00019 794 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Pral2656g00019 794 SMART serkin_6 476 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00019 794 PIRSF SRK 1 425 IPR024171 GO:0004674
Pral2656g00019 794 PIRSF SRK 422 794 IPR024171 GO:0004674
Pral2656g00019 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 439 551 - -
Pral2656g00019 794 Pfam D-mannose binding lectin 71 174 IPR001480 -
Pral2656g00019 794 SMART blect_4 29 149 IPR001480 -
Pral2656g00019 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Pral2656g00019 794 ProSiteProfiles Protein kinase domain profile. 476 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00019 794 Pfam PAN-like domain 338 403 IPR003609 -
Pral2656g00019 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Pral2656g00019 794 Gene3D Phosphorylase Kinase; domain 1 435 551 - -
Pral2656g00019 794 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Pral2656g00019 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 417 - -
Pral2656g00019 794 MobiDBLite consensus disorder prediction 755 794 - -
Pral2656g00019 794 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2656g00019 Pral-Chr2656 91612 94967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2656g00019 424 762 Receptor kinase-like Gene Family AT4G23140 55.172 1.25e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2656g00019 PK_Tyr_Ser-Thr 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2656g00019 - - pcin:129316778 1078.54