Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2656g00017 ATGTCACCAGAATATGCTGCCGACGGGTTGTTTTCAATAAAATCTGATGTTTTCAGTTTTGGTGTTTTGTTGTTAGAGATAATAACTGGTAGAAAAAGTAAAGGCTTCTATCATGCAGACAATACTAATAACCTTGTTGGTCATGCATGGACACAATGGAAAGAAGGAAGGGTTCTAGAACTCATTGACAAAAATATTGAAGACTCATGTAATGAACCGGAAGTATTGCGTTGTATACACATTGGCCTTTTGTGTGTTCAGCATGATCCTGAAGATAGGCCTACTATGTCAATGGTGGTTCTAATGCTAGGAAGCAATATGGAATTGACAGAGCCCAAGCAACCTGGTTTTTATGCGAGAAAACTGTCGATTGAAACAAGTTCTTCTTCAACTCAGTTAGAACATGTATCTGCTAATGAAATGACAATTTCTCAATTAGAAGCTCGATAA 450 0.3733 MSPEYAADGLFSIKSDVFSFGVLLLEIITGRKSKGFYHADNTNNLVGHAWTQWKEGRVLELIDKNIEDSCNEPEVLRCIHIGLLCVQHDPEDRPTMSMVVLMLGSNMELTEPKQPGFYARKLSIETSSSSTQLEHVSANEMTISQLEAR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2656g00017 149 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Pral2656g00017 149 SUPERFAMILY Protein kinase-like (PK-like) 1 129 IPR011009 -
Pral2656g00017 149 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 149 - -
Pral2656g00017 149 Pfam Domain of unknown function (DUF3403) 106 149 IPR021820 GO:0004674
Pral2656g00017 149 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00017 149 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Pral2656g00017 149 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2656g00017 Pral-Chr2656 89184 90298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2656g00017 1 149 Receptor kinase-like Gene Family AT4G23150 50.000 9.85e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2656g00017 PK_Tyr_Ser-Thr 3.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2656g00017 - - cic:CICLE_v10008568mg 199.134