Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2656g00016 ATGGCCATTCTTTCTTTCCTGGCTCTCCTTTCCTTTGTACTTGTCATTTCTCTTCGAGCTTCCATGGCAGTTGATTCCATCCTTCAACCTAGTTCTCAGATGAGTGGTGGCAAGAGATTAGGGTCCAAAGGTGGAAGCTTTGAACTTGGCTTCTTCACTCCTGGAGACTCTGGTAAACACTATCTGGGAATTTGGTACAAGAACATCCCAATTCAGACAGTAGTTTGGGTAGCAAACAGAGTCAACCCAGTCAACGATTCCTCTGCTGCAACCTTAACGCTAAACACTACAGGCAGTCTTGTCCTCACTCAAAACGAGACTGTGGTTTGGTACTCAATTCCTGTGAAACTAGTGCAGAATCCGGTAGCTGAGCTCCTAGATTCTGGGAATCTTGTGGTGAGAGATAAGGAAGAAGCAGACCCAGAAGCCTATTTGTGGCAAAGTTTCGACTTTCCAACTGACACACTATTACCAGAGATGAAATTAGGATGCGACCTAACCACAGGTTTGAATAGGCGTCTTACAGCTTGGAAGAGTCAGGACGATCCATCTCCAGGAGACCTCTCTATGACTGTAGCCCTCAATAGTTATCCTGACTTTTATATGCTGAGAGGAGATTCAAAAATCTTCAGAACTGGTCCGTGGAATGGCATGGGATTTAGCGGCTCCCCAGAATTAAAGCCAAATCCTGTGTTTAGTTACACGTTCGTGTCCAACAAAAGCGGGGTCTACTATTCGTACAGTCTCAAGGATGACTCTGTAATCACAAGGCTAACGATGAACCAATCCAAATCTGTTCGTTATCGTTATGTGTGGACAGAGACTGAGAAAACCTGGAGGATTTATTCAACCATTCCACAGGACTATTGTGACACTTACGGGTTATGTGGACCCAATGGAAATTGTATCCTTTCTGATTCACCAGTGTGCCAATGCTTAGACGGGTTCGAGCCCAAGTCACCGCAAAAATGGAACTCAATAGACTGGTCTGATGGTTGTGTCAGGAAAGTAAAACTGAATTGTGAGGACAAAAAGAAGGTTGGGTTTCTCAAAGTGAGTGGGATGAAATTGCCAGATACTACTCATACTTGGCTGGATGAGACAATAGGCCTGGGAGAATGCAGACAAAAGTGCTTGAACAACTGTTCTTGTATGGCCTACGCAAATTCAGATATAAGAGGACAAGGTGGTGGTTGTGCCATGTGGTTTGGAGATCTGATTGACATCAGACAATTTTCTGCTGGGGGACAGGATCTGTATATTCGGATGGACGCTTCAGAACTAGGCTCACAAAATGAGGGCAGGAAGAAGATGACAATAGCAGCCGCTACCATTATACCCGTTGTTGTTTTTGGGATGCTTTTATTTGGGATGTGTTATATCAGAAATGCGAAAAGAAAACTGAATGAGGAACCAAAAAATTTAGGAGCGCAAAGTAGTGAAGGACAAGAGGAAGATCTGGACCTCCCATTGCTTGACATCTCTGAAATATCTACAGCGACTGATAACTTCTCGATGAAAAAGAAGATTGGTGAAGGCGGCTTTGGACCTGTATACAGGGGACGATTGGAAAATAAGCAAGAAATTGCAGTGAAAAGGCTTTCAAAAATTTCAGGACAAGGAGTCAATGAGTTCAAGAATGAAGTGAAACTGATTGCAAAACTTCAACACCGAAATCTTGTCAAATTGCTTGGATGCTGCATACAAGAGCAAGAGAAAATGCTAGTCTATGAATACATGCCTAATAGTAGCTTAGACTCCTTCATATTTGATAACGATAGAAGTAAAGTGCTCAATTGGTGTAAGCGGTTTAGCATTATTTGTGGGATTGCTCGAGGTCTTCTATATCTTCATCAAGATTCTAGATTAAGGATTATTCATAGGGATCTCAAAGCAAGCAACATTTTACTAGATGATGAGTTGAATCCCAAAATATCAGACTTTGGGTTAGCTAGATCTTTTGGAGGCGACCAGATTGAGGGAAGCACAAACAGAGTAGTAGGGACTTATGGCTACATGTCACCAGAATATGCTGCCGACGGGTTGTTTTCAATAAAATCTGATGTTTTCAGTTTTGGTGTTTTGTTGTTAGAGATAATAACTGGTAGAAAAAGTAAAGGCTTCTATCATGCAGACAATACTAATAACCTTGTTGGTCATGCATGGACACAATGGAAAGAAGGAAGGGTTCTAGAACTCATTGACAAAAATATTGAAGACTCATGTAATGAACCGGAAGTATTGCGTTGTATACACATTGGCCTTTTGTGTGTTCAGCATGATCCTGAAGATAGGCCTACTATGTCAATGGTGGTTCTAATGCTAGGAAGCAATATGGAATTGACAGAGCCCAAGCAACCTGGTTTTTATGCGAGAAAACTGTCGATTGAAACAAGTTCTTCTTCAACTCAGTTAGAACATGTATCTGCTAATGAAATGACAATTTCTCAATTAGAAGCTCGATAA 2466 0.4173 MAILSFLALLSFVLVISLRASMAVDSILQPSSQMSGGKRLGSKGGSFELGFFTPGDSGKHYLGIWYKNIPIQTVVWVANRVNPVNDSSAATLTLNTTGSLVLTQNETVVWYSIPVKLVQNPVAELLDSGNLVVRDKEEADPEAYLWQSFDFPTDTLLPEMKLGCDLTTGLNRRLTAWKSQDDPSPGDLSMTVALNSYPDFYMLRGDSKIFRTGPWNGMGFSGSPELKPNPVFSYTFVSNKSGVYYSYSLKDDSVITRLTMNQSKSVRYRYVWTETEKTWRIYSTIPQDYCDTYGLCGPNGNCILSDSPVCQCLDGFEPKSPQKWNSIDWSDGCVRKVKLNCEDKKKVGFLKVSGMKLPDTTHTWLDETIGLGECRQKCLNNCSCMAYANSDIRGQGGGCAMWFGDLIDIRQFSAGGQDLYIRMDASELGSQNEGRKKMTIAAATIIPVVVFGMLLFGMCYIRNAKRKLNEEPKNLGAQSSEGQEEDLDLPLLDISEISTATDNFSMKKKIGEGGFGPVYRGRLENKQEIAVKRLSKISGQGVNEFKNEVKLIAKLQHRNLVKLLGCCIQEQEKMLVYEYMPNSSLDSFIFDNDRSKVLNWCKRFSIICGIARGLLYLHQDSRLRIIHRDLKASNILLDDELNPKISDFGLARSFGGDQIEGSTNRVVGTYGYMSPEYAADGLFSIKSDVFSFGVLLLEIITGRKSKGFYHADNTNNLVGHAWTQWKEGRVLELIDKNIEDSCNEPEVLRCIHIGLLCVQHDPEDRPTMSMVVLMLGSNMELTEPKQPGFYARKLSIETSSSSTQLEHVSANEMTISQLEAR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2656g00016 821 SMART serkin_6 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00016 821 SMART blect_4 31 152 IPR001480 -
Pral2656g00016 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Pral2656g00016 821 CDD B_lectin 35 152 IPR001480 -
Pral2656g00016 821 Gene3D Phosphorylase Kinase; domain 1 465 579 - -
Pral2656g00016 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 216 IPR036426 -
Pral2656g00016 821 ProSiteProfiles PAN/Apple domain profile. 341 425 IPR003609 -
Pral2656g00016 821 Pfam Protein tyrosine and serine/threonine kinase 505 773 IPR001245 GO:0004672|GO:0006468
Pral2656g00016 821 Pfam D-mannose binding lectin 73 178 IPR001480 -
Pral2656g00016 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 579 - -
Pral2656g00016 821 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Pral2656g00016 821 Gene3D - 20 149 IPR036426 -
Pral2656g00016 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 423 - -
Pral2656g00016 821 ProSiteProfiles Protein kinase domain profile. 504 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00016 821 SUPERFAMILY Protein kinase-like (PK-like) 489 799 IPR011009 -
Pral2656g00016 821 CDD PAN_AP_plant 337 422 - -
Pral2656g00016 821 Gene3D Transferase(Phosphotransferase) domain 1 580 788 - -
Pral2656g00016 821 SMART ntp_6 344 423 IPR003609 -
Pral2656g00016 821 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Pral2656g00016 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Pral2656g00016 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pral2656g00016 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Pral2656g00016 821 Pfam PAN-like domain 341 409 IPR003609 -
Pral2656g00016 821 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Pral2656g00016 821 Pfam Domain of unknown function (DUF3403) 778 821 IPR021820 GO:0004674
Pral2656g00016 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 765 - -
Pral2656g00016 821 CDD STKc_IRAK 510 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2656g00016 Pral-Chr2656 86704 90298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2656g00016 440 789 Receptor kinase-like Gene Family AT4G23230 54.261 4.66e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2656g00016 PK_Tyr_Ser-Thr 3.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2656g00016 - - pcin:129316778 1067.37