Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2655g00003 ATGGCTAAGGGGGAGGACGCTGTCCGAAGGAAGAAGAACAAATCGATTCGCAAGAAGCTCCGAAAGCAGAATGACTCCTCCTCCGTTTCTGCCAAGGTGGCCGCCATCATCGCCGCCAAGAAGCGCCGCCTTTCCGGAAAACGCCGCATGTGCCAGGGGATGTGCTTTAGCCTGCCTACTCCAGATGATCCATTCAATGACCGACAAGGGAAACCAGAATTTAAAAAGAAGCGTTCTAAAAAGAAAACCCATTCCAACAAAGATGAGAGATGTGATGGTGGGAAGAGTGCTGCTGGAACGAAAGACATGCTTGGAGGTAATATTCCAAAAATTAACAAGTTAGGGGAAAATGAAGTCACAGATCTGAAACATGAATATAAAAAATCTGTCACAGCCACCCTGGGGCAGGAATGTATTAACGTGGAAAGAGCAAATATTGAGGTGATTAAGAAGGAGTGCCTTTGTGGTCCCCAGGGAAAAGAATGTGAAAACCCTGAGTCCCCTTCAAAATTTCTATTGTGGTGTTTAAGTTCAATTGAAAATGCACTGCGGCATGATGATGCTTGCACTGATCAAGAGGGAGACTCTTTGCTTTTTGACCCATGGGGATTGGAATTTTGGAAATGTTATTCTACTGGGAAAGATATAATGGAGACCGGTGGAAATTCTGCTACCACTGAACAAATTGCCTGGATGGTTTCTAGTGCTGCCGATACTATTGCAAGAAAGGAGAAAGAAGGCTTATCCTTTGGCAGTCCCTTTCTTCTATTTCTAGTGCCTTCCCAAGAAAAATCTGTTAAGGTCCGCTCGGTCTGCAAGGCTTTGAAACCTCTTGGGATTCATACAGTGAGTATACATCCAGGTGCCTCCTTAGACCACCAGATTCAAGGTCTGAAATGCTGTGAGCCAGAGTTCCTTGTCTCCACTCCTGAAAGGCTTTTGCAACTTGTTTCTTTGAAGGCTATCAATATATCTAGTGTCTCTATGCTGGTTGTTGATCAGTTGAACTCTTTCTTTAGCGATGGCCACATTGATGCTATAAAATCAATCAAGGATTCTATTTCTGGCGCTCCCCGACTTGTAGTTTTCAACAACTGTACCCATTATTCATCTATCCCAACCATTCAAAATCTTTTGGCAGGATCCATTTGTAGACTATCTCTTAATGGTTCAGTTACAAGTCAAAGTTCTTGCATTGTCCAGACTGCAAAAACGTGTGCATCTGAAGAAGAAAGGCTTCAGGAGAGCATCCAAGCCTTGGGTCAGTGTTGGAGTGGCCAGACGTTTAAATCATATGTGTTATATATCGTAAGAAAAATTGTGAAGTCCCAAAAATTGGTGGCTGCACTCAAATCCAGAAGCTCTTCCCTTACAGTTGGGTCTGATTCACAAATATATAATGATAGTGTGGATTCAGAGAGCAGAACGAAACCAGCGGTGGCCTTGATAGATTTTGAGCATATCTCCACTGCAGATATAGGGAAGTATGATATAGTGATTCTACCCAGTTTTGTACCCTCTATTGAACGTTATACGCATATTTTAACAAGGATGGCCCGCCACAGTGTCCATGGTGTCCTGCACAGTTTCCTGACTAAGGGAGACACAAAACACGTCGGACCACTGATTGAAATTCTAGAGCAGTGTGGGCAGGAAGTGCCCGAGGCATTGAGAAACTTGCATGTTACCCCACACATGATGGAAGAGTGA 1710 0.4386 MAKGEDAVRRKKNKSIRKKLRKQNDSSSVSAKVAAIIAAKKRRLSGKRRMCQGMCFSLPTPDDPFNDRQGKPEFKKKRSKKKTHSNKDERCDGGKSAAGTKDMLGGNIPKINKLGENEVTDLKHEYKKSVTATLGQECINVERANIEVIKKECLCGPQGKECENPESPSKFLLWCLSSIENALRHDDACTDQEGDSLLFDPWGLEFWKCYSTGKDIMETGGNSATTEQIAWMVSSAADTIARKEKEGLSFGSPFLLFLVPSQEKSVKVRSVCKALKPLGIHTVSIHPGASLDHQIQGLKCCEPEFLVSTPERLLQLVSLKAINISSVSMLVVDQLNSFFSDGHIDAIKSIKDSISGAPRLVVFNNCTHYSSIPTIQNLLAGSICRLSLNGSVTSQSSCIVQTAKTCASEEERLQESIQALGQCWSGQTFKSYVLYIVRKIVKSQKLVAALKSRSSSLTVGSDSQIYNDSVDSESRTKPAVALIDFEHISTADIGKYDIVILPSFVPSIERYTHILTRMARHSVHGVLHSFLTKGDTKHVGPLIEILEQCGQEVPEALRNLHVTPHMMEE 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2655g00003 569 Pfam DEAD/DEAH box helicase 247 354 IPR011545 GO:0003676|GO:0005524
Pral2655g00003 569 MobiDBLite consensus disorder prediction 53 104 - -
Pral2655g00003 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 251 363 IPR027417 -
Pral2655g00003 569 MobiDBLite consensus disorder prediction 1 32 - -
Pral2655g00003 569 Gene3D - 245 390 IPR027417 -
Pral2655g00003 569 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 12 536 - -
Pral2655g00003 569 Gene3D - 392 563 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2655g00003 Pral-Chr2655 28465 36058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2655g00003 256 560 Eukaryotic Initiation Factors Gene Family AT1G72730 21.290 2.16e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2655g00003 - - pcin:129290678 878.626