Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral264g00003 ATGGGTAGGCCACCCAGCAACGGAGGCCCTGCCTTCCGCTTTACTCAGGCTGAGGTTGCAGAAATGGAAACAATTTTGCAAGAGCATAACAATGCTATGCCAGCACGTGATGTTCTCACAGCTCTTGCAGAGAAGTTCAGTGAATCTCCTGACCGTAGAGGAAAGATTACTGTGCAGATGAAGCAAGTTTGGAACTGGTTTCAAAATAAACGATATGCTATAAGGGCAAAATCTAGTAAGGCTCCTGGAAAATTAAGTATCACTCCTATGGCTCGAGATGAGTCAACCCCACTTAGAAGTATGCCTCAGCCAGTGGCTGCTCCCATACCTCCTGCTTCAGTTTCAACTGTAAAAAGTGCTCCGGAAAACTCAGCAATGGAGTTTGAAGCTAAGTCTGGAAGGGATGGAGCATGGTACGATGTTGCAAACTTTCTATCCCACAGGCATTTGGAATCCAGTGATCCGGAAGTTATGGTCAGATTTGCTGGTTTTGGATCTGAGGAAGATGAGTGGATTAATGTGCGAAAAAATATCCGGCCACGCTCTCTGCCATGTGAATCATCAGAATGTGTGGCAGTTCTCCCAGGGGATCTCATACTGTGTTTTCAGGAAGGTAAGGAGCAGGCTCTTTATTTCGATGCTCATGTCCTTGATGCTCAAAGACGGAGGCATGATGTTAGAGGCTGCCGTTGTAGATTTCTGGTCCGTTATGATCATGATCAATCAGAGGAAATTGTTCCACTTAGGAAGGTTTGTCGTAGGCCCGAGACTGATTACAGGTTGCAACAACTTCACGCTATGAATGAGGCAGCACCTGTGGACCAGCAAAAGACCAGCATGGACTTAATGCCTGCTTATGCTGTCAGGGTAACAAGCTCAGCTGAAACGGTGCCAAAACAGCAGAGTGCAAACATTGCCATTGCCCCACAAGTTTTGCAAGCTACTGTTACTTTAGCCCCACAAACTATGAATGTGGATCAGAGAAAAGCTGAAGTAGCCAATGATATGACCGGAGGAAACACTGTTATCCGCCCAAGTGGTGCTGCATTTACCACCAGTGTTGTTACCAGCAGTGTTCCCCCCGCTGGTACGGCATTTCCCAGCAGTGTTCCGCTCAGTGGTACTGCATTTCCCAGCAATGTTGTTACAAGCAGTGTTCCAGTAGTTTCGAATCAGAATCTGGCCGAAGGAAAATGA 1197 0.4687 MGRPPSNGGPAFRFTQAEVAEMETILQEHNNAMPARDVLTALAEKFSESPDRRGKITVQMKQVWNWFQNKRYAIRAKSSKAPGKLSITPMARDESTPLRSMPQPVAAPIPPASVSTVKSAPENSAMEFEAKSGRDGAWYDVANFLSHRHLESSDPEVMVRFAGFGSEEDEWINVRKNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAMNEAAPVDQQKTSMDLMPAYAVRVTSSAETVPKQQSANIAIAPQVLQATVTLAPQTMNVDQRKAEVANDMTGGNTVIRPSGAAFTTSVVTSSVPPAGTAFPSSVPLSGTAFPSNVVTSSVPVVSNQNLAEGK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral264g00003 398 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 332 IPR039276 -
Pral264g00003 398 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Pral264g00003 398 Gene3D - 10 84 - -
Pral264g00003 398 SMART HOX_1 7 81 IPR001356 GO:0003677
Pral264g00003 398 CDD homeodomain 13 75 IPR001356 GO:0003677
Pral264g00003 398 Pfam SAWADEE domain 125 252 IPR032001 GO:0003682
Pral264g00003 398 Gene3D - 185 257 - -
Pral264g00003 398 Gene3D - 123 184 - -
Pral264g00003 398 SUPERFAMILY Homeodomain-like 4 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral264g00003 Pral-Chr264 40149 48016 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral264g00003 SAWADEE 1.9e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral264g00003 - - qsa:O6P43_001009 551.592