Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2646g00003 ATGTCTCATTCGAACACCGCTAACAACTTCTTCACCCTTACCATAACGTCCATGGTCATGGCTTCCCACAAAATTTTGTTGCTCTTGCTTATCAGCTTCCTCTTTTCTCCTACAACTGAGGCACAGGTCACTTATCTTTACCACAACTGCTCTTCCAACAAAACCTTCACTGTCAATAGTGCTTTTCAATCGGACCGAACCAAACTCCTCTCTTCCTTAGCTTCTGCCAACACTGACTTCTCCAACGCCACCGTCAACGGTGGCGGCGACACCGTCTATGGCCTCTTCATGTGCCGGGGTGACGTCAACCTCTCGATATGCCACCAATGCGTCGTGAACGCCACCCAACGATTATCTTCCGAGTGCAGAGTTTCGAAGGAGGCAATCATCTGGTACGACGAGTGCATGGTTCGCTATTCGAACCGTTCCTTCTTCGCCACCGTAGACACAAGGCCTAGACTCGGCCTCTTGAACACCGGCAATGCCACCCGGCCCAGCTTCTTACAGTTATTGTGGGACACGCTTAACTTTACGGCAGACGATGCAGCCAACGACGCTAAGAAATATGCCACAAGGCAAGCAAGCATATCTGGGTACGGAACTATGTATTCTCTACTTCAGTGCACGCCTGACCTATCATCCCAAGATTGCAGAAAATGTCTGAGTGCTGTGATTGGAGACCTTTCATGGTGCTGTGTGGGAAAACAAGGAGGAAGAGTTCTATATCCCAGCTGCAACGTTCGCTATGAGTTCTATCCTTTCTATAATAACTCTGATGATCAGCCAGAAGCGACGACTCCTACACCGCCTGCCACTATTGTGATAGTTGTGGTTTCTTTTGTTGGTGGTCTGGGGATATTTTTTTGTGTCGCCTACTATCTCTCAAAGAGTCTAATCAAGAAGAGACGCAGCGCTCTTCTCAGACAAAAATACTTTGGAAATGAAGGCAATAATTTAGAGCCTCTACAATTTAGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTCGCATGAAAAATGTTTAGGCCAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTTCAAATGGTCAAGAAATAGCTGTCAAGAGACTTTCAAAAAATTCTTGTCAAGGTGGAGAAGAATTCAAGAATGAGGTTTTATTGATTGCCAAACTTCAACACAGAAATTTGGTGGCCTTGCTTGGATTTTGCATAGAAGAACAAGAGAAAATCCTCGTTTATGAATATGTTCCGAACAAAAGCCTCGACTACTTTCTATTTGGTTCCCAAAAAGGCAAAGTATTAAATTGGGTTGAGCGTTGTAAAATCATTGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGTCTCAAAATTATACATCGTGATCTCAAACCAAGCAATATTTTATTAGATGATGAATTGAATCCAAAAATCTCAGATTTTGGATTAGCTAAAATGGTTGCTATCAACACAAATGAAGGAAGTACAAATAGAATAGTTGGGACATATGGCTATATGTCTCCAGAATATGCAATGTACGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAATGTTAGAGATTATCAGTGGAAAGAAGAATACAAGTCGTCATAGCCAATCACAGCATGCTGATGGCCTATTGAGCTGTGCCTGGAAGCAATGGAAGGAGGAAAAGTTGCTGGAGATATTAGATTCGAATATAAAAGAATTTGGGTCATATAATGAAGTGATCAAGTGCATCCAGATTGGCTTGTTATGTGTTCAAGAAGATCCAGATACAAGACCCACAATGGCTGCGGTTGTTTCCTATCTTAGTAATGATTCCATTCAGCTCCCATTGCCAGAGGAACCTGCATTCTTTCTAGACGTTAGAATTGGGCCCAGTACCAGTGGAAGTAAGGAATCAGGCTCGACCATTGAAGTGTCTATGAGTGAATTCTTTCCTCGTTAA 1962 0.4241 MSHSNTANNFFTLTITSMVMASHKILLLLLISFLFSPTTEAQVTYLYHNCSSNKTFTVNSAFQSDRTKLLSSLASANTDFSNATVNGGGDTVYGLFMCRGDVNLSICHQCVVNATQRLSSECRVSKEAIIWYDECMVRYSNRSFFATVDTRPRLGLLNTGNATRPSFLQLLWDTLNFTADDAANDAKKYATRQASISGYGTMYSLLQCTPDLSSQDCRKCLSAVIGDLSWCCVGKQGGRVLYPSCNVRYEFYPFYNNSDDQPEATTPTPPATIVIVVVSFVGGLGIFFCVAYYLSKSLIKKRRSALLRQKYFGNEGNNLEPLQFSLATIEAATNKFSHEKCLGQGGFGQVYKGVLSNGQEIAVKRLSKNSCQGGEEFKNEVLLIAKLQHRNLVALLGFCIEEQEKILVYEYVPNKSLDYFLFGSQKGKVLNWVERCKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDDELNPKISDFGLAKMVAINTNEGSTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIMLEIISGKKNTSRHSQSQHADGLLSCAWKQWKEEKLLEILDSNIKEFGSYNEVIKCIQIGLLCVQEDPDTRPTMAAVVSYLSNDSIQLPLPEEPAFFLDVRIGPSTSGSKESGSTIEVSMSEFFPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2646g00003 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 635 - -
Pral2646g00003 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pral2646g00003 653 FunFam Cysteine-rich receptor-like protein kinase 25 152 254 - -
Pral2646g00003 653 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Pral2646g00003 653 ProSiteProfiles Gnk2-homologous domain profile. 44 144 IPR002902 -
Pral2646g00003 653 FunFam cysteine-rich receptor-like protein kinase 10 412 615 - -
Pral2646g00003 653 Pfam Protein kinase domain 337 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2646g00003 653 ProSiteProfiles Protein kinase domain profile. 336 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2646g00003 653 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Pral2646g00003 653 Gene3D - 154 254 IPR038408 -
Pral2646g00003 653 Gene3D - 41 144 IPR038408 -
Pral2646g00003 653 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Pral2646g00003 653 Pfam Salt stress response/antifungal 50 141 IPR002902 -
Pral2646g00003 653 Pfam Salt stress response/antifungal 171 251 IPR002902 -
Pral2646g00003 653 SMART serkin_6 336 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2646g00003 653 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 43 143 - -
Pral2646g00003 653 FunFam Cysteine-rich receptor-like protein kinase 10 299 411 - -
Pral2646g00003 653 CDD STKc_IRAK 342 608 - -
Pral2646g00003 653 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Pral2646g00003 653 MobiDBLite consensus disorder prediction 633 653 - -
Pral2646g00003 653 SUPERFAMILY Protein kinase-like (PK-like) 319 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2646g00003 Pral-Chr2646 18461 21932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2646g00003 33 653 Receptor kinase-like Gene Family AT4G05200 45.113 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2646g00003 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2646g00003 - - pcin:129286093 823.542