Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2644g00001 ATGCCGCCCAAACCTGAGTCCGCTTCAAAGTCAAACCCATACTTCAAACCCGGCTCCGTCGTCGAGGTAAGCTCCGACGATGAAGGATTTCGCGGATCTTGGTTTGTTGGCACCATTGTTGGCCGCTGCACTTCCAAGAAAAACCAGAGCAAATTCTTGGTGGAGTATAAAACCATCATGGCCGACGAGAAGGGTTCCAAACCCCTGAGAGAGATGCTGGACCTTCACCAGCTTCGGCCCCTCGCCCCAAGGGAGACTGACCGCCGATTCAAGTTCGGCGAGGAGGTCGATGCATACCACAATGATGGCTGGTGGGAAGGCTCCATAACCGAAGAATTGGGAAACGGGAGGTTCGCGGTGTATTTCAGGCCCTCCAAGGAGCAGATTGAGTTCGGGAAGGAAGACCTTAGGCTCCATCGTGAGTGGGTCAATGGGAATTGGGTCCCTCCATTGGAAGAACCGTCCGAGGAAAAACTCTTAATCGAATGGCAGAAAATTTTGGCAAACGATGTGAAGGCTAGTGAAGAAACAGTGACGGACATGTTTAGCAAGGGGACACTAGTTGAGGTTAGCAGTGACGAGGAAGGTTTCGAAGGAGCTTGGTTTGCTGCTACTGTTGTTGAACCAAAGGGAAAGGATAAGTTTCTGGTTGAGTACCTGAACCTACGGACTGATGACGATTCGGAGTTCTTGAGAGAGGAAATTGATATGTTACATATTCGGCCTCATCCACCGGAACATGTTTTTGATCAGTTTAATCTTCTTCAAGAAGTTGATGCTTTGTACAATGATGGATGGTGGGTTGGAGTGATTTCCAAAGTTCTTAGCAACTCAAGATACGTAGTCTACTTCAGGAACACCAATGAAGAATTAGAGTTTCCGCACTCCGAGTTAAGGCTACATCAGGACTGGATCAGCGGAAAATGGGTCATTGCTTCTAAGGCATTGAAGTTGTAG 957 0.4838 MPPKPESASKSNPYFKPGSVVEVSSDDEGFRGSWFVGTIVGRCTSKKNQSKFLVEYKTIMADEKGSKPLREMLDLHQLRPLAPRETDRRFKFGEEVDAYHNDGWWEGSITEELGNGRFAVYFRPSKEQIEFGKEDLRLHREWVNGNWVPPLEEPSEEKLLIEWQKILANDVKASEETVTDMFSKGTLVEVSSDEEGFEGAWFAATVVEPKGKDKFLVEYLNLRTDDDSEFLREEIDMLHIRPHPPEHVFDQFNLLQEVDALYNDGWWVGVISKVLSNSRYVVYFRNTNEELEFPHSELRLHQDWISGKWVIASKALKL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2644g00001 318 CDD Tudor_Agenet_AtDUF_rpt1_3 182 245 - -
Pral2644g00001 318 CDD Tudor_Agenet_AtDUF_rpt1_3 15 83 - -
Pral2644g00001 318 CDD Tudor_Agenet_AtDUF_rpt2_4 254 300 - -
Pral2644g00001 318 SMART agenet_At_2 180 248 IPR014002 -
Pral2644g00001 318 SMART agenet_At_2 250 306 IPR014002 -
Pral2644g00001 318 SMART agenet_At_2 88 144 IPR014002 -
Pral2644g00001 318 SMART agenet_At_2 13 86 IPR014002 -
Pral2644g00001 318 Gene3D - 172 253 - -
Pral2644g00001 318 CDD Tudor_Agenet_AtDUF_rpt2_4 93 138 - -
Pral2644g00001 318 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 174 314 - -
Pral2644g00001 318 Pfam Agenet domain 18 83 IPR008395 -
Pral2644g00001 318 Pfam Agenet domain 185 245 IPR008395 -
Pral2644g00001 318 Pfam Agenet domain 93 151 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2644g00001 Pral-Chr2644 6506 9738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2644g00001 192 304 PHD Transcription Factor Family AT5G58610 30.597 8.71e-10 58.2