Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2643g00003 ATGGATTTGAAGTCGTCTCATGCTTCTCCTGTTCTTACTGATCCTGTTCCAATAACCAAGTCAAGACTAGGAATGCATTCTGGTCTCATAAGTTACTCCCAGCAAGATTCATCTCTCTCATCCCTCTCTCCTGTTAAGTATCCAAGAAATGGTTCGAGAAAAAGCTCAGGAAACCTTGATGATGTTCGTTCTAATGGTTGGCTCGACGCCATGAAAGCTTCTTCACCTCCTAGGAAGAAGCAGCCCACCAAAGGCTTCAACTCTCACATGGATTCCGAGCAAGACTATCGCTCCTGGTTGCTGGATTATCCTTCAGCACTGGAATGTTTTGAGGAAATGATTGAGCATGCGAAGAACAAGAAGATTGCAATGTTCCTAGACTACGACGGAACTCTTTCACCCATAGTGGATGATCCAGATTGTGCTTTCATGTCTGAAGCTATGCGTAGTGTAGTGAGGGATGTGGCAAAGTGTTTTCCTACGGCAATCATCAGTGGAAGAAGCCGAGACAAGGTTTACGACTTGGTTAAATTAACGGAACTGTACTATGCTGGTAGCCATGGGATGGACATTATTGGGCCTGCCTGTCACAATCTGTCCAATAGCCATCCAGACAGTGTTAAGTCCACTGACCAGCAGGGAAAGGAGATAACTCTGTTTCAACCTGCGAGAGGATTCCTGCCCATGATTGATGAGGTTTTCAAAAGGCTGGTGGAGATCAGTAAAGATATAAAAGGTGCAAAGGTTGAGAACCACAAGTTTTGTGTTTCTGTACATTATCGTAATGTAGAAGAAAACAATTGGACACTTATTGGACAACTTGTGCATGACATGTTAAAAGATTACCCTCTTTTACGTTTAACACACGGACGCAAGGTTTTAGAGGTTCGTCCTGTGATAGATTGGAACAAAGGAAAAGCGGTTGAATTTTTACTTGACTCCCTGGGTTTAAGTGAACGGGATGACGTGCTTGCCATCTACATAGGAGATGATAAGACCGATGAGGATGCTTTCAAGGCGTTGAGAGAGAGCAGAGGAGGCTATGGGATCTTAGTTTCCTCCACCAGAAAACAAAGCAATGCCTTCTATTCTCTGCGGGACCCATCTGAGGTCAAGAAATTTTTGGAGATGTTGGTGAATTGGAAGATGGAAGAAGAAAATAAGCAACAAAAGAAGAGCCATTCATTTTGA 1191 0.4349 MDLKSSHASPVLTDPVPITKSRLGMHSGLISYSQQDSSLSSLSPVKYPRNGSRKSSGNLDDVRSNGWLDAMKASSPPRKKQPTKGFNSHMDSEQDYRSWLLDYPSALECFEEMIEHAKNKKIAMFLDYDGTLSPIVDDPDCAFMSEAMRSVVRDVAKCFPTAIISGRSRDKVYDLVKLTELYYAGSHGMDIIGPACHNLSNSHPDSVKSTDQQGKEITLFQPARGFLPMIDEVFKRLVEISKDIKGAKVENHKFCVSVHYRNVEENNWTLIGQLVHDMLKDYPLLRLTHGRKVLEVRPVIDWNKGKAVEFLLDSLGLSERDDVLAIYIGDDKTDEDAFKALRESRGGYGILVSSTRKQSNAFYSLRDPSEVKKFLEMLVNWKMEEENKQQKKSHSF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2643g00003 396 Gene3D - 227 395 IPR023214 -
Pral2643g00003 396 Gene3D - 122 211 IPR023214 -
Pral2643g00003 396 FunFam Trehalose 6-phosphate phosphatase 223 299 - -
Pral2643g00003 396 MobiDBLite consensus disorder prediction 39 90 - -
Pral2643g00003 396 FunFam Trehalose 6-phosphate phosphatase 229 388 - -
Pral2643g00003 396 SUPERFAMILY HAD-like 123 381 IPR036412 -
Pral2643g00003 396 MobiDBLite consensus disorder prediction 39 62 - -
Pral2643g00003 396 Pfam Trehalose-phosphatase 125 369 IPR003337 GO:0003824|GO:0005992
Pral2643g00003 396 CDD HAD_TPP 123 371 - -
Pral2643g00003 396 NCBIfam trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Pral2643g00003 396 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 50 391 IPR044651 GO:0004805|GO:0005992
Pral2643g00003 396 NCBIfam HAD-IIB family hydrolase 124 342 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2643g00003 Pral-Chr2643 38609 42933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2643g00003 116 378 Trehalose Biosynthesis Gene Families AT1G70290 25.448 2.62e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2643g00003 K01087 - qsa:O6P43_024315 556.214