Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2642g00002 ATGATTGCCCCATTTGTTTCGTACGACATCAAGGCAACCGAGTGGCAATCTGTGACAGTCTCAGGCATCAAGTGCTGCGACGTGGTAATTAAAATTGATAGCATGAGGACAGACTGGTTGTTGGGCTGTTTGGAATGCAGAATTTGGTATCGTTGGAGGAGTTGCAAAGCAGATCTGAATTTAGATCAGTTCAACATCAGGGTTATTGAGCCAGTAGGATTCGGTCCGTTTAGGAAGGTTTATCGTTGTCATGAACTGGACAGTAATCGAGTTGTGGCAGTCAAGGAGGTTTACGCTGGTGACGAAAGTGAAGAAGTCATGATAGATGACAGAATCGCGTTTCTTAAAGATTGCAACCATCAAAACGTTGTCAGGTTGCTTCATACATTGAAAAGGGGATGTTATCTCTATCTTGTTTTTGAGTATATCAGCCCAAATCTGTACTATTTCATGAACCTACCAGAACACTGTAAATATCCAAAACAAAGAAATTATTTGTTGTATCAGATACTCGCTGCTGTAGCACACTATCATTCTCACGGGCTTCTCCTCCGAGATCTGAAACCGCAGGATCTACTAATGGATTTTCGTGATGGTTACCTCAAGCTAGGTGATTTCGGTTTGTACGGTGCATTCGGAGATCCTGAGCCTTGTGATATACCAGTTTCCGAGTATACTGCGCCTGAGGTCTTGCTTGATTCATATCAACATTCACCGGCGTCTGATCTGTGGGCCGTAGGTTGTATATTTGGAGAGATAGTCATCGGGAAGCCTCTATTTCATCTTGGCAAAAGCAATCAGGATCAGCTAAGAACCATTTTCCGTTTGTTAGGCACTCCAACTGAGGAATCTTGGCCAGGAATTAGTGACCTATGCCCTACACTTACCTTCTATCCCAAGTTTGAGCCACTGAACTTGTCTTCAAAGTTTCCTGATTTGGAACCAGAAGGCATAGATATACTTTCGAAATTGCTGTGTCTTGATCCAAATAACAGAATTTCAGCGGAAGCAGCTCTTGGCCATGCATTCTTCAACAATGATTTGTGGGTGACGAGCTGTTCCGAATGGGGAATTTGTAATCCCTGGATTGTATCGGCACCCAATTTAGAGGAATTCCATTACAAGGTTATTGGGGAGGTCAGAAACTGTGCGTTTAACAAGGTTTACCGTTGCTTTCAAACTTACAAGGAACGAATGGTATTCATCAAGGAGATTTTCATTCCTGACGAATATAATGTAAAGGCTCGGAGATCGATAAGTGCTAAATTGAATTTTCTTCGATTCTTTCATCACCCAAACGTTTTAAGGATGGTGGATACGTTCAGCAAGGGAAAGTGCTTGTATATTGTTTATGAGTATTTTTCCATGGATCTGTACCATATGATTACGTTACCACCGGTCATGAGAGAAGCACAGATAAAACTCACATTCTTTTCTTCGTCCAAGAAGTTGGTTCTTCAACAGATACTCTCTGCTGTAGAACAATATCATTCTTATGAGATTATCGTCGGAGATATAAAGCCAGAACACCTGCGATATAGCCACTGTGAACGTTCAGTCAAGCTAGCTGACTTCGGCTTCGCCGGTGCATTTGGAGACCCCTGGGCGTCTTATCCAATAAAAACCTCCCGGTACAGTGCTCCTGAACTCCTGTTTGGGACTCGTCGATTTTCAAAGGCAGTTGATATGTGGTCTGTGGGTTGTATATTTGGTGAGATGGTAATTGGGAAAGCAATATTCCAGGGCACAACTCCAAGGGAACAATTGATGTCAATTTTCCGTTTGTTAGGTACACCAACTGAGGAATCCTGGCCAGGAGTGACTACGATGTGTAGAACACTTTCACGCTTTCCCAAATATAGACCAAAGAACCTGGTAGAAGAGTTCCCTGGTTTGGAACCAGAAGGCATTGATCTTCTTTCCCAAATGCTTTGCCTGGATCCAGAAGGAAGAATTTCAGCTGAAGAAGCTCTTGATCATGAATACTTCAATTTAAGAGGGGGTCCGGTGAGAGAAGGATTCTGCAAACAGCAGAACAGATGGGAAGGTTTAGTCCGCCAGATCGAAGATGCTCGTATTGATGATTTTGGAGTGCAGTAG 2100 0.4295 MIAPFVSYDIKATEWQSVTVSGIKCCDVVIKIDSMRTDWLLGCLECRIWYRWRSCKADLNLDQFNIRVIEPVGFGPFRKVYRCHELDSNRVVAVKEVYAGDESEEVMIDDRIAFLKDCNHQNVVRLLHTLKRGCYLYLVFEYISPNLYYFMNLPEHCKYPKQRNYLLYQILAAVAHYHSHGLLLRDLKPQDLLMDFRDGYLKLGDFGLYGAFGDPEPCDIPVSEYTAPEVLLDSYQHSPASDLWAVGCIFGEIVIGKPLFHLGKSNQDQLRTIFRLLGTPTEESWPGISDLCPTLTFYPKFEPLNLSSKFPDLEPEGIDILSKLLCLDPNNRISAEAALGHAFFNNDLWVTSCSEWGICNPWIVSAPNLEEFHYKVIGEVRNCAFNKVYRCFQTYKERMVFIKEIFIPDEYNVKARRSISAKLNFLRFFHHPNVLRMVDTFSKGKCLYIVYEYFSMDLYHMITLPPVMREAQIKLTFFSSSKKLVLQQILSAVEQYHSYEIIVGDIKPEHLRYSHCERSVKLADFGFAGAFGDPWASYPIKTSRYSAPELLFGTRRFSKAVDMWSVGCIFGEMVIGKAIFQGTTPREQLMSIFRLLGTPTEESWPGVTTMCRTLSRFPKYRPKNLVEEFPGLEPEGIDLLSQMLCLDPEGRISAEEALDHEYFNLRGGPVREGFCKQQNRWEGLVRQIEDARIDDFGVQ 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2642g00002 699 Gene3D Phosphorylase Kinase; domain 1 60 144 - -
Pral2642g00002 699 ProSiteProfiles Protein kinase domain profile. 66 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2642g00002 699 Pfam Protein kinase domain 384 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2642g00002 699 Pfam Protein kinase domain 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2642g00002 699 Gene3D Transferase(Phosphotransferase) domain 1 151 352 - -
Pral2642g00002 699 Gene3D Transferase(Phosphotransferase) domain 1 476 677 - -
Pral2642g00002 699 SUPERFAMILY Protein kinase-like (PK-like) 68 349 IPR011009 -
Pral2642g00002 699 Gene3D Phosphorylase Kinase; domain 1 372 455 - -
Pral2642g00002 699 PANTHER CELL DIVISION PROTEIN KINASE 374 663 - -
Pral2642g00002 699 ProSiteProfiles Protein kinase domain profile. 374 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2642g00002 699 SUPERFAMILY Protein kinase-like (PK-like) 373 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2642g00002 Pral-Chr2642 4333 16091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2642g00002 373 668 Core Cell Cycle Gene Families AT3G48750 36.455 3.18e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pral2642g00002 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2642g00002 K02206 - mof:131143523 246.899