Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2642g00001 ATGACGTCAAATATGGAGATCAAGCTAGCTGACTTCGGTTTCGCCGGTTCATTTGAAGATCCTTGGACAACTTATCCTATAAAAACTTCAGAGTACAGTGCTCCTGAACTTCTTTTTGGATCACGTCGATATTCAAAGGAAGCTGATATGTGGTCTGTCGGTTGTGTATTTGGAGAGATGGTCACTGGGAAACCTGTATTCCAGGGCAAATCTCAAGAGGACCAATTGAAGTCAACTTTTCGTTTGTTAGGTACCCCAACTGAGGAATCCTGGCCTCGATTGACTGAGATATGTAGTCGTAGGACGCTTTCATGCTTTCCCAAATGTGAACCAATG 336 0.4345 MTSNMEIKLADFGFAGSFEDPWTTYPIKTSEYSAPELLFGSRRYSKEADMWSVGCVFGEMVTGKPVFQGKSQEDQLKSTFRLLGTPTEESWPRLTEICSRRTLSCFPKCEPM 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2642g00001 112 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2642g00001 112 Pfam Protein kinase domain 4 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2642g00001 112 PANTHER CELL DIVISION PROTEIN KINASE 3 94 - -
Pral2642g00001 112 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Pral2642g00001 112 SUPERFAMILY Protein kinase-like (PK-like) 2 102 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2642g00001 Pral-Chr2642 70 989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2642g00001 7 111 Core Cell Cycle Gene Families AT3G48750 46.729 8.91e-28 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pral2642g00001 Pkinase 3.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2642g00001 - - pcin:129316733 171.785