Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2639g00008 ATGTGTATTGCGGACGTGAGAGTAGGGCACCACCAGAATTTGGACAAGAGAATTCTAATAGCACTTATTGTTTGTTCTGCTCTTCTTGTCTCAATCTTCCTATTTTTAACATATATCTGGTGTCATCGACGCAAAATTTTCAAAGTTCCCAGTTCTAAAAGCCCTGAGACCATCGAAGCTGCAAATGGGGTGTCACTTAGCCCCGTTGATGTTAAATTTAGTTACTCAAAAATGGCAGAAAAGAAGAGTGCAATTGCTATATTTGACTTTCAGTTGTTAGACGTTGCAACAAACAGCTTTGCCAAAAGTAATATTCTGAGTGAGAGTGGATCTAGGCTAGTGTACAGAGCTTGCTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCAGTGCTGATAGAGAATTTGAGAATGAAGTGAATTGGTTAAGCAAGATTCGGCATCAGAATATCATTAAACTTCTTGGTTACTGTATTCATGGTGAATCAAGGTTTCTTGTATATGAAATGATGGAGAATGGATCTTTGGAAACTCAATTACATGGACCTGATCGTGGATCATCTTTAAATTGGTACCTCCGGTTAAAGATTGCCATTCATGTTGCCAGGGCATTAGAACATCTTCATGAGCACTCTAATCCTCCCGTGGTTCATAGAGACCTAAAATCTTCTAATGTTCTCCTGGATTCTCACTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATACAGATGTCAGGAACTCTGGGTTATGTAGCACCTGAGTACATATCACATGGTAAGCTAACTGATAAGAGTGATGTATATGCTTTTGGGGTTGTCCTTCTAGAGCTTCTAACGGGAAGAAAAGCCGTGGACAAGATGTCCTCAGACCAATACCAATCCATTGTCACATGGGCCATGCCTCAGATAACTGACAGATCAAAGATTCCAAGTATTATAGATCCTGTAATCAGAAACACCATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTTTGTGTACAAACAGAACCAAGTTATCGGCCGCTAATAACTGATGTCCTGCACTCTCTCATCCCTTTGGTACCCACGGAGCTGGGAGGATCACTCAGAGTTTCAGAATCAGTTTGCTCCGAGAATTTGCATTGA 1173 0.4092 MCIADVRVGHHQNLDKRILIALIVCSALLVSIFLFLTYIWCHRRKIFKVPSSKSPETIEAANGVSLSPVDVKFSYSKMAEKKSAIAIFDFQLLDVATNSFAKSNILSESGSRLVYRACFDEHLKAAVKKADSSADREFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGSLETQLHGPDRGSSLNWYLRLKIAIHVARALEHLHEHSNPPVVHRDLKSSNVLLDSHFNAKLSDFGLAVSSGMQDKNIQMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKAVDKMSSDQYQSIVTWAMPQITDRSKIPSIIDPVIRNTMDLKHLYQVAAVAVLCVQTEPSYRPLITDVLHSLIPLVPTELGGSLRVSESVCSENLH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2639g00008 390 SUPERFAMILY Protein kinase-like (PK-like) 79 366 IPR011009 -
Pral2639g00008 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pral2639g00008 390 FunFam probable receptor-like protein kinase At1g80640 173 371 - -
Pral2639g00008 390 PANTHER OS01G0750732 PROTEIN 4 371 - -
Pral2639g00008 390 SMART serkin_6 100 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2639g00008 390 Gene3D Phosphorylase Kinase; domain 1 66 172 - -
Pral2639g00008 390 ProSiteProfiles Protein kinase domain profile. 100 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2639g00008 390 Gene3D Transferase(Phosphotransferase) domain 1 173 373 - -
Pral2639g00008 390 Pfam Protein kinase domain 114 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2639g00008 Pral-Chr2639 47243 50136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2639g00008 6 312 Receptor kinase-like Gene Family AT1G80640 48.875 3.59e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pral2639g00008 Pkinase 3.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2639g00008 - - gmx:100811188 606.675