Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2637g00034 | ATGACGGGAGTTTGGTTTGTGGTCTTGATGATTCTCTTCCATGGATTCTGTTTGACCGTGGCGGGCTCGAATCATTCCACACGACCCGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAAGACCACCGTCGGTCGAATTGCAAAGATTGCAATAGAAGCTGCAATTGAAGACATAAATTCTGATCCATCTATTCTCGGTGAAACTAAGCTCAATGTCTCGATGCAAGAGGATTCCAAATACAGGGGCTTTCTGAGCATTGCTGAGGCCTTACATCTCACTGCAAAACGCACGGTGGCCATAATTGGCCCGCAAAGCTCCGTCACAGCTCATGTGATATCACACATTGCAAACGAGCTCCAAGTTCCCCTGCTATCAGTTTCTGCTACGGATCCCACACTCTCCTCCCTTCAATTCCCATTCTTTGTCAGAACTACTCATAGTGATCTTTATCAGATGACTGCAATTGCAGAGCTTGTTGACTACTATGGATGGAGAGAGGTTATCGCAATCTATGTTGACGATGATCATGGAAGAAATGGGATTAGTGTGTTAGGAGATAAGCTTGCTGAGAGACGGTGTAGGATCTCTTTTAAAGCTCCTATGAGCCCTGAAGCAACCAGGGAGGAGATTACTAATGTGCTTGTCCAGGTGGCTTTGGCAGAATCTAGGATAATAGTTGTGCACACCATTGCTGCTTGGGGACCCAAGGTGTTTAAAGTGGCCAAGCATCTGGAGATGATGGGAGCTGGGTATGTTTGGATAGCCACTCATTTTCTCTCTACTCTTCTGGATACAAATGGTCCACTCCCCCACGATACAATGGACATGATTCAGGGGGTTCTTACGCTGCGTATCCACACACCTGATTCAGAGCTCAGACGAAGATTTGTTTCCAGGTGGAAAAACTTGACTCGCGCCAACGACACTGCCAAAAGTAATGTTCGCCTTGGATTGAGTACTTACGGTCTCTATGCATATGATACTGTTTATGCGCTTGCTCGTGCGCTTGATAGTTTCTTCAAGCAGGGGAATCGAATAACATTCTCGTATGATCCCAAATTGTCTGAGCTGCGCGGTGACAACTTGCATCTTGATTCTGTGAGCATCTTCGATCAAGGAAACGTGTTGAGAGAAAGTATCTATGAGGTTGATATGACAGGGGTAACTGGTACTTTCAGGTATGCATCTGATGGGAACCTTGTGAATCCAGCATATGAAATCCTCAATGTGATCGGGACAGGATCTAGGAGGATTGGTTATTGGAGTAACTACACTGGATTATCGGTTGTTGCTCCAGAAGTGCTCTACGCACACCCCCCCAATCGCTCAGCGGCGAGTCAGAAGCTGCGACCAGTGATTTGGCCGGGGAACACAGAGCAGAAGCCTCGTGGTTGGGTTTTTCCAAATAATGGGAGGCTCTTAAAAATTGGGGTGCCAGTGGGATTCAGTTACCGTCAATTTGTCTCACAGGTACAAGGCACTGACATGTTCAAGGGCTTCTGCATTGATGTATTCCTTTCTGCGCTGAACTTGCTGCCTTATGGCGTACCTTATAGGCTTGTTCCGTTTGGGGATGGTCACAGCAATCCTAATAGCAACGAGCTTGTTCGTTTGATCACGGCGGGTGTCTTTGATGGGGCAGTTGGCGACATTACAATTACTACGCAGCGAACAAGGATGGTAGATTTCACTCAGCCATTTATTGGGTCTGGTCTAGTGGTTGTAGCCCCGGTTAGGAAGTCAGACTCCAGTGCTTGGGCCTTTTTGAGATCCTTCAGTCCGCAGATGTGGGGCGTCACTGCTATCTTCTTCCTAGCTGTTGGTGCTGTTGTTTGGATATTGGAGCATAGATCGAATGATGAATTCCGGGGGCCTCCCAGAAAACAAGTAGTTACAGTTTTGTGGTTCAGTTTTTCGACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACTCTGGGTCGATTGGTGCTTCTCATATGGTTATTTGTGGTTCTTATAATAAACTCGAGTTACACGGCAAGCCTGACTTCAATCCTCACAGTGCAGCAGCTTTCTTCTCCCATTAAAGGCATTGAAACTTTAGTTGCCAGCACAGAGCCTGTTGGCTACCTGCAGGGTTCATTCAGTAGAAACTACTTGATAGAAGAAATCGGGATTGATGAATCAAGACTTGTTCCCCTGAGGACGCCGGAAGAGTCCGCTAAAGCATTAAGAGATGGCCCCAAAAAGGGCGGCGTTGCTGCGTATGTTGATGAGCGTGCTTACATTGAACTCTTCCTTTCAAGCCGATGCGAGTTCAGCATAGTAGGTCAAGAGTTCACCAGAAACGGGTGGGGATTTGCATTTCCGCGAGACTCGCCTCTGGCGCTTGACTTGTCGACGGCCATATTGAAATTGGCAGAGAACGGAGATCTGCAAAGGATTCACGACAAATGGCTTCTGAATATCGCCTGCCTCTCGCAGAATACCAAGTTTGAAGCGGACGGGCTTCGTCTCAAAAGCTTCTGGGGGCTCTATCTAATCTGCGGCGTGGCGTGCTTGCTGGCTCTGTTCGTGTATGTGATACTGATGATGAGGCAGTACAAGAAGCACCACGCAGCGGCGGTTGAGTCTTGTGCAGGGTCCTCTTCCAGCATTCGGACTTTCCTCACATTTGCAGACCAGAAGGAATCTGAAGTCAAGAGCCGATCCAAGAAAAGGCAAATGGAGAGGCTCTCCGGCGGAGGCTCGGATGCTGGCGGATCATCAGCCCTCAATTCTAACAATCGATACCCTCTGTCATCTTCCATAACAAACATAAATTCCGCCGCTGAAGCCTGA | 2826 | 0.4774 | MTGVWFVVLMILFHGFCLTVAGSNHSTRPDSVNIGVLYSFKTTVGRIAKIAIEAAIEDINSDPSILGETKLNVSMQEDSKYRGFLSIAEALHLTAKRTVAIIGPQSSVTAHVISHIANELQVPLLSVSATDPTLSSLQFPFFVRTTHSDLYQMTAIAELVDYYGWREVIAIYVDDDHGRNGISVLGDKLAERRCRISFKAPMSPEATREEITNVLVQVALAESRIIVVHTIAAWGPKVFKVAKHLEMMGAGYVWIATHFLSTLLDTNGPLPHDTMDMIQGVLTLRIHTPDSELRRRFVSRWKNLTRANDTAKSNVRLGLSTYGLYAYDTVYALARALDSFFKQGNRITFSYDPKLSELRGDNLHLDSVSIFDQGNVLRESIYEVDMTGVTGTFRYASDGNLVNPAYEILNVIGTGSRRIGYWSNYTGLSVVAPEVLYAHPPNRSAASQKLRPVIWPGNTEQKPRGWVFPNNGRLLKIGVPVGFSYRQFVSQVQGTDMFKGFCIDVFLSALNLLPYGVPYRLVPFGDGHSNPNSNELVRLITAGVFDGAVGDITITTQRTRMVDFTQPFIGSGLVVVAPVRKSDSSAWAFLRSFSPQMWGVTAIFFLAVGAVVWILEHRSNDEFRGPPRKQVVTVLWFSFSTMFFAHRENTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIETLVASTEPVGYLQGSFSRNYLIEEIGIDESRLVPLRTPEESAKALRDGPKKGGVAAYVDERAYIELFLSSRCEFSIVGQEFTRNGWGFAFPRDSPLALDLSTAILKLAENGDLQRIHDKWLLNIACLSQNTKFEADGLRLKSFWGLYLICGVACLLALFVYVILMMRQYKKHHAAAVESCAGSSSSIRTFLTFADQKESEVKSRSKKRQMERLSGGGSDAGGSSALNSNNRYPLSSSITNINSAAEA | 941 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2637g00034 | 941 | FunFam | Glutamate receptor | 470 | 586 | - | - | |
Pral2637g00034 | 941 | SUPERFAMILY | Periplasmic binding protein-like I | 27 | 467 | IPR028082 | - | |
Pral2637g00034 | 941 | CDD | GluR_Plant | 475 | 815 | - | - | |
Pral2637g00034 | 941 | FunFam | Glutamate receptor | 586 | 716 | - | - | |
Pral2637g00034 | 941 | Gene3D | - | 778 | 814 | - | - | |
Pral2637g00034 | 941 | MobiDBLite | consensus disorder prediction | 914 | 941 | - | - | |
Pral2637g00034 | 941 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 32 | 891 | IPR015683 | - | |
Pral2637g00034 | 941 | PIRSF | IGluLR_plant | 1 | 938 | IPR017103 | - | |
Pral2637g00034 | 941 | SMART | GluR_14 | 476 | 817 | IPR001320 | GO:0015276|GO:0016020 | |
Pral2637g00034 | 941 | CDD | PBP1_GABAb_receptor_plant | 33 | 432 | IPR044440 | - | |
Pral2637g00034 | 941 | SUPERFAMILY | Periplasmic binding protein-like II | 453 | 816 | - | - | |
Pral2637g00034 | 941 | Pfam | Receptor family ligand binding region | 50 | 413 | IPR001828 | - | |
Pral2637g00034 | 941 | Gene3D | - | 148 | 428 | - | - | |
Pral2637g00034 | 941 | Gene3D | - | 750 | 777 | - | - | |
Pral2637g00034 | 941 | MobiDBLite | consensus disorder prediction | 894 | 941 | - | - | |
Pral2637g00034 | 941 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 326 | 338 | - | - | |
Pral2637g00034 | 941 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 106 | 134 | - | - | |
Pral2637g00034 | 941 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 45 | 61 | - | - | |
Pral2637g00034 | 941 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 237 | 260 | - | - | |
Pral2637g00034 | 941 | Gene3D | - | 586 | 711 | - | - | |
Pral2637g00034 | 941 | Gene3D | - | 460 | 585 | - | - | |
Pral2637g00034 | 941 | FunFam | Glutamate receptor | 712 | 819 | - | - | |
Pral2637g00034 | 941 | FunFam | Glutamate receptor | 148 | 305 | - | - | |
Pral2637g00034 | 941 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 532 | 815 | IPR001638 | - | |
Pral2637g00034 | 941 | Pfam | Ligand-gated ion channel | 816 | 848 | IPR001320 | GO:0015276|GO:0016020 | |
Pral2637g00034 | 941 | Gene3D | - | 50 | 403 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2637g00034 | Pral-Chr2637 | 150818 | 154829 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2637g00034 | 5 | 912 | Ion Channels | AT3G51480 | 59.365 | 0.0 | 1142 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2637g00034 | K05387 | - | gmx:100788917 | 1363.59 |