Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2637g00033 ATGACGGGAGTTTGGTTTGTGGTCTTGATGATTCTCTTCCATGGATTCTGTTTGACCGTGGCGGGCTCGAATCATTCCACACGACCCGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAAGACCACCGTCGGTCGAATTGCAAAGATTGCAATAGAAGCTGCAATTGAAGACATAAATTCTGATCCATCTATTCTCGGTGAAACTAAGCTCAATGTCTCGATGCAAGAGGATTCCAAATACAGGGGCTTTCTGAGCATTGCTGAGGCCTTACATCTCACTGCAAAACGCACGGTGGCCATAATTGGCCCGCAAAGCTCCGTCACAGCTCATGTGATATCACACATTGCAAACGAGCTCCAAGTTCCCCTGCTATCAGTTTCTGCTACGGATCCCACACTCTCCTCCCTTCAATTCCCATTCTTTGTCAGAACTACTCATAGTGATCTTTATCAGATGACTGCAATTGCAGAGCTTGTTGACTACTATGGATGGAGAGAGGTTATCGCAATCTATGTTGACGATGATCATGGAAGAAATGGGATTAGTGTGTTAGGAGATAAGCTTGCTGAGAGACGGTGTAGGATCTCTTTTAAAGCTCCTATGAGCCCTGAAGCAACCAGGGAGGAGATTACTAATGTGCTTGTCCAGGTGGCTTTGGCAGAATCTAGGATAATAGTTGTGCACACCATTGCTGCTTGGGGACCCAAGGTGTTTAAAGTGGCCAAGCATCTGGAGATGATGGGAGCTGGGTATGTTTGGATAGCCACTCATTTTCTCTCTACTCTTCTGGATACAAATGGTCCACTCCCCCACGATACAATGGACATGATTCAGGGGGTTCTTACGCTGCGTATCCACACACCTGATTCAGAGCTCAGACGAAGATTTGTTTCCAGGTGGAAAAACTTGACTCGCGCCAACGACACTGCCAAAAGTAATGTTCGCCTTGGATTGAGTACTTACGGTCTCTATGCATATGATACTGTTTATGCGCTTGCTCGTGCGCTTGATAGTTTCTTCAAGCAGGGGAATCGAATAACATTCTCGTATGATCCCAAATTGTCTGAGCTGCGCGGTGACAACTTGCATCTTGATTCTGTGAGCATCTTCGATCAAGGAAACGTGTTGAGAGAAAGTATCTATGAGGTTGATATGACAGGGGTAACTGGTACTTTCAGGTATGCATCTGATGGGAACCTTGTGAATCCAGCATATGAAATCCTCAATGTGATCGGGACAGGATCTAGGAGGATTGGTTATTGGAGTAACTACACTGGATTATCGGTTGTTGCTCCAGAAGTGCTCTACGCACACCCCCCCAATCGCTCAGCGGCGAGTCAGAAGCTGCGACCAGTGATTTGGCCGGGGAACACAGAGCAGAAGCCTCGTGGTTGGGTTTTTCCAAATAATGGGAGGCTCTTAAAAATTGGGGTGCCAGTGGGATTCAGTTACCGTCAATTTGTCTCACAGGTACAAGGCACTGACATGTTCAAGGGCTTCTGCATTGATGTATTCCTTTCTGCGCTGAACTTGCTGCCTTATGGCGTACCTTATAGGCTTGTTCCGTTTGGGGATGGTCACAGCAATCCTAATAGCAACGAGCTTGTTCGTTTGATCACGGCGGGTGTCTTTGATGGGGCAGTTGGCGACATTACAATTACTACGCAGCGAACAAGGATGGTAGATTTCACTCAGCCATTTATTGGGTCTGGTCTAGTGGTTGTAGCCCCGGTTAGGAAGTCAGACTCCAGTGCTTGGGCCTTTTTGAGATCCTTCAGTCCGCAGATGTGGGGCGTCACTGCTATCTTCTTCCTAGCTGTTGGTGCTGTTGTTTGGATATTGGAGCATAGATCGAATGATGAATTCCGGGGGCCTCCCAGAAAACAAGTAGTTACAGTTTTGTGGTTCAGTTTTTCGACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACTCTGGGTCGATTGGTGCTTCTCATATGGTTATTTGTGGTTCTTATAATAAACTCGAGTTACACGGCAAGCCTGACTTCAATCCTCACAGTGCAGCAGCTTTCTTCTCCCATTAAAGGCATTGAAACTTTAGTTGCCAGCACAGAGCCTGTTGGCTACCTGCAGGGTTCATTCAGTAGAAACTACTTGATAGAAGAAATCGGGATTGATGAATCAAGACTTGTTCCCCTGAGGACGCCGGAAGAGTCCGCTAAAGCATTAAGAGATGGCCCCAAAAAGGGCGGCGTTGCTGCGTATGTTGATGAGCGTGCTTACATTGAACTCTTCCTTTCAAGCCGATGCGAGTTCAGCATAGTAGGTCAAGAGTTCACCAGAAACGGGCATTTCCGCGAGACTCGCCTCTGGCGCTTGACTTGTCGACGGCCATATTGA 2388 0.4707 MTGVWFVVLMILFHGFCLTVAGSNHSTRPDSVNIGVLYSFKTTVGRIAKIAIEAAIEDINSDPSILGETKLNVSMQEDSKYRGFLSIAEALHLTAKRTVAIIGPQSSVTAHVISHIANELQVPLLSVSATDPTLSSLQFPFFVRTTHSDLYQMTAIAELVDYYGWREVIAIYVDDDHGRNGISVLGDKLAERRCRISFKAPMSPEATREEITNVLVQVALAESRIIVVHTIAAWGPKVFKVAKHLEMMGAGYVWIATHFLSTLLDTNGPLPHDTMDMIQGVLTLRIHTPDSELRRRFVSRWKNLTRANDTAKSNVRLGLSTYGLYAYDTVYALARALDSFFKQGNRITFSYDPKLSELRGDNLHLDSVSIFDQGNVLRESIYEVDMTGVTGTFRYASDGNLVNPAYEILNVIGTGSRRIGYWSNYTGLSVVAPEVLYAHPPNRSAASQKLRPVIWPGNTEQKPRGWVFPNNGRLLKIGVPVGFSYRQFVSQVQGTDMFKGFCIDVFLSALNLLPYGVPYRLVPFGDGHSNPNSNELVRLITAGVFDGAVGDITITTQRTRMVDFTQPFIGSGLVVVAPVRKSDSSAWAFLRSFSPQMWGVTAIFFLAVGAVVWILEHRSNDEFRGPPRKQVVTVLWFSFSTMFFAHRENTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIETLVASTEPVGYLQGSFSRNYLIEEIGIDESRLVPLRTPEESAKALRDGPKKGGVAAYVDERAYIELFLSSRCEFSIVGQEFTRNGHFRETRLWRLTCRRPY 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2637g00033 795 Gene3D - 586 711 - -
Pral2637g00033 795 FunFam Glutamate receptor 470 586 - -
Pral2637g00033 795 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 326 338 - -
Pral2637g00033 795 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 237 260 - -
Pral2637g00033 795 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Pral2637g00033 795 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Pral2637g00033 795 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 779 IPR015683 -
Pral2637g00033 795 Gene3D - 460 585 - -
Pral2637g00033 795 FunFam Glutamate receptor 586 716 - -
Pral2637g00033 795 SUPERFAMILY Periplasmic binding protein-like II 453 777 - -
Pral2637g00033 795 CDD PBP1_GABAb_receptor_plant 33 432 IPR044440 -
Pral2637g00033 795 SMART GluR_14 476 789 IPR001320 GO:0015276|GO:0016020
Pral2637g00033 795 FunFam Glutamate receptor 148 305 - -
Pral2637g00033 795 PIRSF IGluLR_plant 1 781 IPR017103 -
Pral2637g00033 795 Pfam Ligand-gated ion channel 595 700 IPR001320 GO:0015276|GO:0016020
Pral2637g00033 795 Pfam Ligated ion channel L-glutamate- and glycine-binding site 490 576 IPR019594 GO:0004970|GO:0016020
Pral2637g00033 795 Gene3D - 148 428 - -
Pral2637g00033 795 Gene3D - 50 403 - -
Pral2637g00033 795 Pfam Receptor family ligand binding region 50 413 IPR001828 -
Pral2637g00033 795 SUPERFAMILY Periplasmic binding protein-like I 27 467 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2637g00033 Pral-Chr2637 150818 154834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2637g00033 5 779 Ion Channels AT3G51480 60.516 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2637g00033 K05387 - gmx:100788917 1187.17