Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2637g00024 ATGACTCGAACGCTTCGAATCCTCAATTCCCTCGACCGCGCCGCCGCCGGTGCTCCCCCGCCCGAGGCCGTCGCCGTCGAATCCGACTTCGTCGTTATTCTCGCCGCCCTCCTCTGCGCCCTCATATGCGTCGTCGGCCTCATCGCCGTCGCCCGTTGCGCCTGGCTCCGCCGTGGATCCGGCACCTCCGCCTCCCCCGCGCGGGCTCTGGCCAACAAAGGTCTGAAGAAGAAAGTTCTGCGGTCGCTCCCGAGATTCACCTACGTTAACGGCAATCCAATTAAGTGGGTGGCCACGTCGGAGTGCGCGATTTGCCTGGCCGAGTTCGCCGATGGCGACGAGATCCGGGTGCTTCCTCAGTGCGGGCACGGCTTTCACGTGGCTTGCATAGACACGTGGCTGGGGTCCCACTCTTCGTGCCCCTCTTGTCGGCAGATTCTGGCGGTAGCCAGGTGCCAGAGGTGCGGCCAGTACCCGGCGGTAGGAGGCGGGGGATCGGCCGGAGCCGCCAGTAGCTCTGCCGGTGAACCTGAGCTGAAGTCCAGAGAGGACGACAATGCCGCTTCTACTACTGCCAATAATAACATAAGCAGCGGGTTTAATAATTTCTTGCCCTGA 618 0.6278 MTRTLRILNSLDRAAAGAPPPEAVAVESDFVVILAALLCALICVVGLIAVARCAWLRRGSGTSASPARALANKGLKKKVLRSLPRFTYVNGNPIKWVATSECAICLAEFADGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILAVARCQRCGQYPAVGGGGSAGAASSSAGEPELKSREDDNAASTTANNNISSGFNNFLP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2637g00024 205 SMART ring_2 102 143 IPR001841 -
Pral2637g00024 205 MobiDBLite consensus disorder prediction 186 205 - -
Pral2637g00024 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 149 IPR013083 -
Pral2637g00024 205 SMART FANCL_C_2 98 152 - -
Pral2637g00024 205 FunFam E3 ubiquitin-protein ligase ATL6 63 150 - -
Pral2637g00024 205 Pfam Ring finger domain 101 144 IPR001841 -
Pral2637g00024 205 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 23 156 - -
Pral2637g00024 205 CDD RING-H2_EL5-like 101 144 - -
Pral2637g00024 205 SUPERFAMILY RING/U-box 87 149 - -
Pral2637g00024 205 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Pral2637g00024 205 MobiDBLite consensus disorder prediction 163 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2637g00024 Pral-Chr2637 126559 127973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2637g00024 25 155 C3H Transcription Factor Family AT1G20823 69.504 1.03e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2637g00024 - - pcin:129322223 347.436