Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2637g00011 ATGGTTCATAACGAACCTGCGACACCGCAAGCAGTTCCTGTTGATACAAAAGCTGGGGCTGAGAATGGCATAAAAGTTGAGACTAAGGTCCATGAAGAGCATACTGCAACACTTGTAGATAAAGGAAATTCAAACACAAAGCTCTCTTTTTTAGATGTTGATTATGATGGAAATGAGTCAGGCACCGAAGCAGAGCAGTCTGCTTTTATGAAGGAGCTTGAAAATTTCTTTAGGGAGAGGAGCATGGAATTTAAACCTCCTAAGTTCTATGGAGAGGGGCTTAATTGTCTTAAGTTGTGGAGAGCAGTGACCAGACTGGGTGGCTATGACAAGGTAACCTCATGTAAGTTATGGCGGCAAGTTGGAGAGTCCTTCAAGCCTCCGAAGACATGTACAACTGTATCATGGACGTTCCGAGGATTTTATGAAAAGGCTCTTCTTGATTATGAAAGGCATAAAACAAAAGGTGGTGAGCTTACTGTTCCTATTGCTTCTCATTCAGAGCCTATAAATATTGAAAATCAGGCTTCAGCATCAGGCAGAGCACGGAGAGATGCTGCAGCACGGGCTATGCAAGGTTGGCACTCACAACGTCTTCTTGGTAATGGTGAAGTTAGTGACCCAATCATTAAGGACAGGACGTCCATGCCCATGCAGAAGCGTGAAAAACAGCTTAAAAGCATCAATTTACTAAAACGTAAGAAACCATCATACATGGATAATGCAGTCAAAGCAGCACGCAGTAAACCATCAAAGCCACAATTGGACACAGCAGTTGTTGATATTGGACCTCCTGCTGATTGGGTAAAGATAAATGTCCAAAAAACTAAAGATTGTTTTGAGGTCTATGCATTAGTTCCTGGCCTTCTGCGAGAAGAGGTTCGTGTTCAATCAGATCCAGCAGGACGATTGGTCATTAGTGGTGAACCTGAGCATCCCGATAATCCCTGGGGGGTGACTCCTTTCAAGAAGGTTGTAACCTTGCCTTCAAGAATTGATCCTCATCAGACATCAGCTGTGGTTACATTGCACGGACAGCTGTTTGTTCGTGTCCCATTTGAACAATCAGAGTAG 1074 0.4358 MVHNEPATPQAVPVDTKAGAENGIKVETKVHEEHTATLVDKGNSNTKLSFLDVDYDGNESGTEAEQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTKGGELTVPIASHSEPINIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRTSMPMQKREKQLKSINLLKRKKPSYMDNAVKAARSKPSKPQLDTAVVDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVTLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2637g00011 357 Gene3D - 63 161 IPR036431 GO:0003677
Pral2637g00011 357 Pfam Hsp20/alpha crystallin family 274 356 IPR002068 -
Pral2637g00011 357 CDD ARID 65 150 - -
Pral2637g00011 357 SMART ARID_2 60 150 - -
Pral2637g00011 357 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 257 357 IPR002068 -
Pral2637g00011 357 Gene3D - 251 357 IPR008978 -
Pral2637g00011 357 CDD ACD_sHsps-like 272 352 - -
Pral2637g00011 357 Pfam ARID/BRIGHT DNA binding domain 66 150 IPR001606 GO:0003677
Pral2637g00011 357 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 15 356 IPR045147 GO:0006357
Pral2637g00011 357 SUPERFAMILY ARID-like 57 167 IPR036431 GO:0003677
Pral2637g00011 357 ProSiteProfiles ARID domain profile. 63 154 IPR001606 GO:0003677
Pral2637g00011 357 SMART bright_3 64 155 IPR001606 GO:0003677
Pral2637g00011 357 FunFam AT-rich interactive domain-containing protein 3 249 357 - -
Pral2637g00011 357 FunFam AT-rich interactive domain-containing protein 3 63 162 - -
Pral2637g00011 357 SUPERFAMILY HSP20-like chaperones 266 353 IPR008978 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2637g00011 58 355 ARID Transcription Factor Family AT1G76510 64.356 1.10e-131 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pral2637g00011 HSP20 2.4e-06 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2637g00011 - - pcin:129284429 694.115