Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2633g00005 ATGCAACAAACATCAGAACTAAGAAGTCGTGCTTTTTCTCACTCTTATGTCCTTGAGATCACTGATAACTTACAAAACTTGATTGGAGAAGTTAGACATTTGGTTTCTCTGATGGGATATTGCGAAGAAAGTGGTGTCAGGGCATTAATATATGAATATATGGCTAATGGAAACCTCCACCATCATTTGTCAAGTAATAAAGCGCGTGAATTGAAATGGAAAGATAGGCTTCAAATTGCATTGGGTGCAGCATATGGATTGGATTATTTGCACAATGGTTGTAAGCCTGCAATTGTGCATAGAGACCTTAAGGCCTCCAACATTTTGCTGGACGAGAACATGGAGCCAAAGATCGCTGACTTTGGATTGTCTAGAGCTTTTGCAAATGATATTGATAGTCACGTCTCAACTCATCCTGCAGGCACATTCGGTTACCTTGATCCTCAATTTCAAAATTCTGGAAACCTTACAAAAGGAAGTGATGTTTATAGTTTTGGAATAATTCTGCTGGAACTGGTGACTAGAAAACCAGCAGCAAAAAGACAACCAAACAATACCTTCATTCTTCTGCTTGAATGGGTCACCCCTAAACTTGGAAGCAAGGATATCCAGTCCATTGTTGATCCAAGGTTACAGGGACAATACAGTATTGAATCTGCTTGGAAATTTCTTGAGATAGCCAAGTCATGTACCGCACCAATCGCAATTCAGAGGCCTGACATAAGCCAAGTAGTAGTTGATCTAAGGGAATGTTTGGCGATGGAGATAAGAATGGAAGGGACCAATCACAACACTAATTCAAGCTCTTCCTTGGATATGAGTGCTAATCTGCAATTTGATTCAAGCTTCGGTGCTCCGTCTGCTAGATAG 870 0.4046 MQQTSELRSRAFSHSYVLEITDNLQNLIGEVRHLVSLMGYCEESGVRALIYEYMANGNLHHHLSSNKARELKWKDRLQIALGAAYGLDYLHNGCKPAIVHRDLKASNILLDENMEPKIADFGLSRAFANDIDSHVSTHPAGTFGYLDPQFQNSGNLTKGSDVYSFGIILLELVTRKPAAKRQPNNTFILLLEWVTPKLGSKDIQSIVDPRLQGQYSIESAWKFLEIAKSCTAPIAIQRPDISQVVVDLRECLAMEIRMEGTNHNTNSSSSLDMSANLQFDSSFGAPSAR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2633g00005 289 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 54 261 - -
Pral2633g00005 289 SUPERFAMILY Protein kinase-like (PK-like) 31 248 IPR011009 -
Pral2633g00005 289 Gene3D Transferase(Phosphotransferase) domain 1 55 274 - -
Pral2633g00005 289 Gene3D Phosphorylase Kinase; domain 1 8 54 - -
Pral2633g00005 289 PANTHER OS07G0107800 PROTEIN-RELATED 30 258 - -
Pral2633g00005 289 Pfam Protein tyrosine and serine/threonine kinase 25 246 IPR001245 GO:0004672|GO:0006468
Pral2633g00005 289 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2633g00005 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Pral2633g00005 289 SMART serkin_6 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2633g00005 Pral-Chr2633 85361 87477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2633g00005 8 289 Receptor kinase-like Gene Family AT3G46330 43.333 3.08e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2633g00005 PK_Tyr_Ser-Thr 6.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2633g00005 - - pcin:129289896 453.366