Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00009 ATGGATCAGAACCAGCATGGGCTAGCTGCAGGAGGAGGAATGTCTGGTGTTTCTGCTCAAGGGGCATATGGAATGAACCAATATCAACCTAACCCAATGATGGCTGCTCCTCAGACTCAGACTCAGTCCCAGTCTCCTTCTCAGGCAGCATCAGGTCTTCCTGCATCGTCTTCTTCCTTCCTGAGAGAGCAACAATATGCTCACCAGTACATGCATCAGCTTCAGCAACAAGAGCTGCGGCAACAACTGCAGAACTTTTGGACTAATCAATACCATGAAATTGAGCAGATTGCTGATTTCAAGAATCATAGCCTGCCTTTAGCTCGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATTTCAGCTGAGGCTCCAGTGATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGAGCTGACACTCAGATCTTGGATCAATGCTGAAGAGAACAAGAGGAGGACACTTCAGAAGAATGATATTGCTGCAGCGATCACCAAGACTGATGTGTTTGATTTTCTGGTTGATATTGTGCCAAGAGATGACTTGAAGGATGAAATGCTCCCAGGTGTTCCTAGAGTCCCAGCAGCAGCAGAGAATGTTCCTTACTACTACATGCCACCTCAGCAAGTTGTGGGTCCCCCTCCTCCGCATTCTCCTCATTCTCCATATGGTGCTCCAAAAGTGATCATGGGCAGGCCTGTGGTTGATCAAACTGATTATGGTCAGCCACCACACCCTTCTTTCTCTGCACAAGTCTGGCCATACCACCAAAACCCCCCATCAAACAACAATTCAGATTCTTGA 813 0.476 MDQNQHGLAAGGGMSGVSAQGAYGMNQYQPNPMMAAPQTQTQSQSPSQAASGLPASSSSFLREQQYAHQYMHQLQQQELRQQLQNFWTNQYHEIEQIADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDEMLPGVPRVPAAAENVPYYYMPPQQVVGPPPPHSPHSPYGAPKVIMGRPVVDQTDYGQPPHPSFSAQVWPYHQNPPSNNNSDS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00009 270 MobiDBLite consensus disorder prediction 254 270 - -
Pral2628g00009 270 MobiDBLite consensus disorder prediction 237 270 - -
Pral2628g00009 270 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 104 167 IPR003958 -
Pral2628g00009 270 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 50 201 - -
Pral2628g00009 270 Gene3D Histone, subunit A 66 182 IPR009072 GO:0046982
Pral2628g00009 270 FunFam Nuclear transcription factor Y subunit gamma 69 182 - -
Pral2628g00009 270 SUPERFAMILY Histone-fold 57 176 IPR009072 GO:0046982
Pral2628g00009 270 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00009 Pral-Chr2628 127500 129734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00009 1 256 CCAAT-HAP5 Transcription Factor Family AT1G08970 53.846 2.45e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral2628g00009 CBFD_NFYB_HMF 5.1e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00009 K08066 - qsa:O6P43_021613 272.707