Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00007 ATGGCTTTTGTGCAGCTATCTCCAATCTTCTTGTCTCTTTTATTTGCCTTGCTTTCACTTTCTGTAGCTGCTCAAACTTCAAGGAATATCATGTCTCCAGGTTCATCCCTAACGGCTGTGAAAGATGGATCATCATTCTGCGCTTCAACATCTGATGAATTTGCATTTGGGTTCAAACAGATCGAGGAAGATGGATTCCTACTAGCCATCTGGTTCAACAAAATACTAGAAACAACAGTTGTTTGGTCAGCCAATGGACAAAAACTTGTACCAGAGGGTTCTAAAGTTGAGCTCACCTCAAATGGTTGGTTCCACCTCGTTGATCCCAAAGGTAAGCAAATTTGGAATGCCAACCCTTTAGGAAATGAAATTGCTCGTGCAGCCATGCTTGATTCTGGTAACTTTGTGTTATTTGGTCATGACTCTCAAAAATTGTGGCAGAGCTTTGCTCAACCCACTGACACAATTTTGCCAGGGCAAGTCTTGAAAGAACCTGCTAAACTTGTTTCACGCTATTTGGAAACTGACTATTCATCTGGAAGATTTCAGTTTAAAGTACAGACTGATGGGAATCTTGTGCTTTATACAACCAATTTCCCAAAGGATGAAGTGAATTTTCCTTATTGGAGTACTCAAGTTTTAGATACTGCTCGCTTCTCTTTGAACTTCAACCTATCAGGCTATATATTTTTAGGTGCAGATAATGGAAGTATAATTAGCACAATATCGTCAAATGCTCCATCTACACAAGATTTCTATCAAAGAGCTGTTCTTGATTATGATGGAGTCTTTAGGCACTATATCTGCCCCAAGAATGATAGTTCTAGCACTGGAAAATGGTCAATTGTGTCTGTCACACCTTTAAATATATGTTTACGAGTTACTGAAAAGACAGGGAGCGGAGCTTGTGGTTGGAACAGTTATTGTACATTTAATGGGACGATTAAAAGTTGCCATTGTCCACGTGGTTATAGTTTTATTGATCCAAGGGATGTGATGAAAGGTTGCAAACAGGACTTTGCTTCGCAAAGTTGTGATCAAACTTCTTCAGAAACAGATCTGTTTGATTTCGACGAGATGCCCAATACGGATTGGCCAGAGTCTGATTATGAACACTTCCAATCAGTGACTGAGGATTGGTGCAGACAAGAGTGTTTAGAAGACTGCTTTTGTTCCTCTATTATCTTCAGAGATGGAGAATGCTGGAAGAAGAAGAAACCTCTCTCTAATGGAAGAGAGGATCCTTCTATTGGAGGGAAAGCTTTGATCAAAATAAGAAAGGATCAGAAGAAAATAAGAACGGATCATTCTCCTTCAAGTCCTGGTGATATCGATAAAAAGACTGATCAATCAACATTGATTATCATAGGTTCTACACTTTTAGGCGGTTCAGTTTTCTTGAACTTCTTGTTACTGATAGCAGCTTGTTTGGTTGCATATCGATTTCGCCAAAATAATTCCAAAGTTCATAAAAATGTCCAATTCATATCAAATATGAATCTCAGAAGTTTCAGCTACGAGGAGTTGGAGGAAGCAACGCATGGGTTCACAGAACAACTTGGCCGTGGTGCATTTTCTATTGTCTACAAAGGATTTCTACCTGACATACCAGGGAATCTCATTGCTGTGAAAAAACTAAATATGTTCAATGGAAGCGATAAGGAATTTGAAGTAGAAGTAAGCGCCATTGGTCGAACTCATCACAGGAACCTGGTGCAACTACTGGGGTTCTGCAACGAAGGAGAGCACAGGCTACTTGTCTATGAATTTATGAGTAGGGGAACTTTAGCTAATTTCCTTTTTGAAGATCAAAGGCCGACTTGGCATCAAAGAGTGCAAATTGCAATAGGAATAGCTAAAGGACTACTGTACTTACATGAAGACTGCAACACTCGGATCATTCACTGTGACATCAAACCTCAAAATGTCCTGCTTGATGACTGTTACACAGCTAAAATTTCAGATTTTGGGATAGCAAAGTTATTGAAGATTGACCAATCTGTAACTACTACAGCAATAAGAGGAACTAAGGGGTATGTTGCAGCAGAGTGGTTCAAAAACCAGCCAATTACCTTGAAGGTGGATGTTTACAGCTTTGGAGTTTTGTTATTGGAACTCATTTGTTGCAGAAAGAACTTTGATATGAATGTTGAAGATGAGCATAAGATGATACTAATAGATTGGGCATATGATTGTTTTCACTATAGGAGATTGGACCTATTAGTGGAAGATGATGAGGAAGCTCAAATGGACATGAAGAGGGCAGAAGAGTATGTGAAGATCAGCATATGGTGTATTCAAGAGAATCCATCAATAAGACCCACCATGAAGCAAATTGTACAAATGCTTGAAGGAGTCATGGATGTATCAAATCCTCCTGACCTCCCATCCTTTACAAGTTAA 2403 0.3928 MAFVQLSPIFLSLLFALLSLSVAAQTSRNIMSPGSSLTAVKDGSSFCASTSDEFAFGFKQIEEDGFLLAIWFNKILETTVVWSANGQKLVPEGSKVELTSNGWFHLVDPKGKQIWNANPLGNEIARAAMLDSGNFVLFGHDSQKLWQSFAQPTDTILPGQVLKEPAKLVSRYLETDYSSGRFQFKVQTDGNLVLYTTNFPKDEVNFPYWSTQVLDTARFSLNFNLSGYIFLGADNGSIISTISSNAPSTQDFYQRAVLDYDGVFRHYICPKNDSSSTGKWSIVSVTPLNICLRVTEKTGSGACGWNSYCTFNGTIKSCHCPRGYSFIDPRDVMKGCKQDFASQSCDQTSSETDLFDFDEMPNTDWPESDYEHFQSVTEDWCRQECLEDCFCSSIIFRDGECWKKKKPLSNGREDPSIGGKALIKIRKDQKKIRTDHSPSSPGDIDKKTDQSTLIIIGSTLLGGSVFLNFLLLIAACLVAYRFRQNNSKVHKNVQFISNMNLRSFSYEELEEATHGFTEQLGRGAFSIVYKGFLPDIPGNLIAVKKLNMFNGSDKEFEVEVSAIGRTHHRNLVQLLGFCNEGEHRLLVYEFMSRGTLANFLFEDQRPTWHQRVQIAIGIAKGLLYLHEDCNTRIIHCDIKPQNVLLDDCYTAKISDFGIAKLLKIDQSVTTTAIRGTKGYVAAEWFKNQPITLKVDVYSFGVLLLELICCRKNFDMNVEDEHKMILIDWAYDCFHYRRLDLLVEDDEEAQMDMKRAEEYVKISIWCIQENPSIRPTMKQIVQMLEGVMDVSNPPDLPSFTS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00007 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Pral2628g00007 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 791 - -
Pral2628g00007 800 FunFam S-receptor-like serine/threonine-protein kinase 483 590 - -
Pral2628g00007 800 ProSiteProfiles Protein kinase domain profile. 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00007 800 Gene3D Transferase(Phosphotransferase) domain 1 591 794 - -
Pral2628g00007 800 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral2628g00007 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Pral2628g00007 800 Gene3D - 152 277 IPR036426 -
Pral2628g00007 800 SMART blect_4 28 152 IPR001480 -
Pral2628g00007 800 Pfam D-mannose binding lectin 79 163 IPR001480 -
Pral2628g00007 800 Pfam Protein kinase domain 517 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00007 800 SUPERFAMILY Protein kinase-like (PK-like) 490 784 IPR011009 -
Pral2628g00007 800 Gene3D - 24 151 IPR036426 -
Pral2628g00007 800 FunFam Serine/threonine-protein kinase 153 294 - -
Pral2628g00007 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 150 - -
Pral2628g00007 800 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 795 - -
Pral2628g00007 800 CDD PAN_AP_plant 343 425 - -
Pral2628g00007 800 ProSitePatterns Protein kinases ATP-binding region signature. 520 545 IPR017441 GO:0005524
Pral2628g00007 800 SMART serkin_6 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00007 800 CDD B_lectin 28 152 IPR001480 -
Pral2628g00007 800 Gene3D Phosphorylase Kinase; domain 1 476 590 - -
Pral2628g00007 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 212 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00007 Pral-Chr2628 102779 105181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00007 466 788 Receptor kinase-like Gene Family AT5G45780 38.066 5.24e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2628g00007 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00007 - - aip:107638596 979.163