Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00006 ATGCTGACTGCTGCTCAAACTTCAAGGAATATCATCTCTCTAGGTTCATCCCTAACGGCGGGGAAAGATAGATCATCATTCTGCACTTCAACATCTGATGAATTTGCATTTGGGTTCAAACAGATCGAGGAAGATGGATTCCTACTAGCCATCTGGTTCAACAAAATACCAGAAACCACAGTTGTTTGGTCAGCCAATGGACAAAAGCTTGCACCAAAGGGTTCTAAAGTTGAGCTCACCTCAAATGGTTGGTTCCATCTTGTTGATCCCGAAGGTAAGCAAATTTGGAATGCCAACCCTTTAGGTAAAATTGCTTGTGCAGCCATGCTTGATTTTGGTAACTTTGTGTTATTTGGTCATGACTCTCAAAAATTGTGGCAGAGCTTTGCGCGACCCACTGACACAATTTTACCAGGGCAAGTCTTGAAAGAACCTGCTACACTTGTTTCACGCTATTTGGAAACTAACTATTCACCTGGAAGATTTCAGTTTAAACTACAGACTGATGGGAATCTTGTGCTTTACACAACCAATTTCCCAAAGGATGAAGTGAATTCTCCTTATTGGAGTACTCAAGTTTTAGATACTGCTCGCTTCTCTTTGAACTTCAACCTATCAGGCTGTATATTTTTAATTGCAGATAATGGAACTATAATTAGCATAATATCGTCAAATGCTCCATCCACACAAGATTTCTATCAAAGAGCTGTTCTTGATTATGATGGAGTCTTTAGGCACTATATCTACCCCAAGAGTGATAGTTCTAGCACTGGAAAATGGTCAATTGTGTCTGTCACACCTTTAGATATATGTTTACAAGTTACTGAAAAGACAGGAAGCGGAGCTTGTGGTTGGAACAGTTATTGTATATTTAATGGGGGGATTAAAAGTTGCCATTGTCCACATGGTTATAGTTTTATTGATCCAAGGGATGTGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTGATCAAACTTCTTCAGAAACAGATCTGTTTGATCTCAACGAGATGCCCAGTACGGATTGGCCAGAGTCTGATTATGAACACTTCAAATCAGTGACTGAGGATTGGTGCAGACAAGAGTGTTTAGAAGATTGCTTTTGTTCCGCTATTACCTTCAGAGATGGAGAATGCTGGAAGAAGAAGAAACCTCTCTCTAATGGAAGAAAGCATAATTCTATTGGAGGGAAAGCTTTGATCAAAATAAGAAAGGATTATTCTCCTTTAAGTCCTGATGATATTGATCAAAAGACTGATCAATCAACATTGATTATAATAGGTTCTACACTTTTAAGCGGTTCAGTTTTCTTGAACTTCTTGTTACTAATAGCAGCTTGTTTGGTTGCATATCGATTTGGCCAAAATAATTCCAAAGTTAATAAAAATGTCCAATTCATATCAAATATGAATCTCAGAAGTTTCAGCTACAAGGAATTGAAGGAAGCAACACATGGGTTCACAGAAGAACTTGGCCGTGGTGCATTTTCCATTGTCTACAAAGGATTTCTACCTGACATACCAGGGAATCTCATTGCTGTGAAAAAACTACATATGTTCAATGGAAGCGATAAGGAATTTGAAGTAGAAGTAAGCGCCATTGGTCGAACTCATCACAGGAATCTGGTGCAACTGCTGGGATTCTGCAATGAAGGAGAGCACAGGCTACTTGTCTATGAATTTATGAGCAGAGGAACTTTAGCTAATTTCCTTTTTGAAGATCAAAGGCCAACTTGGCATCAAAGAATGCAAATTGCAATAGGAATAGCTAAAGGACTTCTGTACTTACATGAAGAGTGCAATACCCGGATCATTCACTGTGATATCAAACCTCAAAATGTCCTGCTGGATGACTTTTACACAGCTAAAATTTCAGATTTTGGGATAGCAAAGCTATTGAAGATTGACCAATCTGTAACTACTACAGCAATAAGAGGAACTAAGGGGTATGTTGCAGCAGAGTGGTTCAAAAACCAGCCAATTACCTTGAAGGTGGATGTTTACAGCTTCGGAGTTTTGTTATTGGAGCTCGTTTGTTGCAGAAAGAACTTTGATATGAATGTTGAAGACGAGTATAAGATGGTACTAATAGATTGGGCATATGATTGCTTTCACTATAGGAGATTGGACCCATTAGTGGAAGATGATGAGGAAGCTCAAATTGACATGAAGAGGGTAGAAGAGTATGTGAAGATCAGCATATGGTGTATTCAAGAGAATCCATCTACAAGACCCACCATGAAGCAAGTTGTGCAAATGCTTGAAGGATTCATGGATGTATCAAATCCTCCTGACCTGCCATCCTTTACAAGTGAATGA 2325 0.3897 MLTAAQTSRNIISLGSSLTAGKDRSSFCTSTSDEFAFGFKQIEEDGFLLAIWFNKIPETTVVWSANGQKLAPKGSKVELTSNGWFHLVDPEGKQIWNANPLGKIACAAMLDFGNFVLFGHDSQKLWQSFARPTDTILPGQVLKEPATLVSRYLETNYSPGRFQFKLQTDGNLVLYTTNFPKDEVNSPYWSTQVLDTARFSLNFNLSGCIFLIADNGTIISIISSNAPSTQDFYQRAVLDYDGVFRHYIYPKSDSSSTGKWSIVSVTPLDICLQVTEKTGSGACGWNSYCIFNGGIKSCHCPHGYSFIDPRDVMKGCKQDFVSQSCDQTSSETDLFDLNEMPSTDWPESDYEHFKSVTEDWCRQECLEDCFCSAITFRDGECWKKKKPLSNGRKHNSIGGKALIKIRKDYSPLSPDDIDQKTDQSTLIIIGSTLLSGSVFLNFLLLIAACLVAYRFGQNNSKVNKNVQFISNMNLRSFSYKELKEATHGFTEELGRGAFSIVYKGFLPDIPGNLIAVKKLHMFNGSDKEFEVEVSAIGRTHHRNLVQLLGFCNEGEHRLLVYEFMSRGTLANFLFEDQRPTWHQRMQIAIGIAKGLLYLHEECNTRIIHCDIKPQNVLLDDFYTAKISDFGIAKLLKIDQSVTTTAIRGTKGYVAAEWFKNQPITLKVDVYSFGVLLLELVCCRKNFDMNVEDEYKMVLIDWAYDCFHYRRLDPLVEDDEEAQIDMKRVEEYVKISIWCIQENPSTRPTMKQVVQMLEGFMDVSNPPDLPSFTSE 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00006 774 SMART serkin_6 487 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00006 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 5 130 - -
Pral2628g00006 774 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 19 768 - -
Pral2628g00006 774 Pfam D-mannose binding lectin 60 143 IPR001480 -
Pral2628g00006 774 Gene3D - 133 262 IPR036426 -
Pral2628g00006 774 Pfam PAN-like domain 331 387 IPR003609 -
Pral2628g00006 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Pral2628g00006 774 FunFam S-receptor-like serine/threonine-protein kinase 456 563 - -
Pral2628g00006 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 564 764 - -
Pral2628g00006 774 ProSitePatterns Protein kinases ATP-binding region signature. 493 518 IPR017441 GO:0005524
Pral2628g00006 774 PIRSF SRK 1 774 IPR024171 GO:0004674
Pral2628g00006 774 Pfam Protein kinase domain 491 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00006 774 SMART blect_4 9 132 IPR001480 -
Pral2628g00006 774 SUPERFAMILY alpha-D-mannose-specific plant lectins 47 192 IPR036426 -
Pral2628g00006 774 Gene3D Transferase(Phosphotransferase) domain 1 564 767 - -
Pral2628g00006 774 CDD PAN_AP_plant 321 405 - -
Pral2628g00006 774 CDD STKc_IRAK 493 759 - -
Pral2628g00006 774 ProSiteProfiles Protein kinase domain profile. 487 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00006 774 ProSiteProfiles Bulb-type lectin domain profile. 9 130 IPR001480 -
Pral2628g00006 774 SUPERFAMILY Protein kinase-like (PK-like) 462 757 IPR011009 -
Pral2628g00006 774 SUPERFAMILY alpha-D-mannose-specific plant lectins 155 247 IPR036426 -
Pral2628g00006 774 Gene3D Phosphorylase Kinase; domain 1 451 563 - -
Pral2628g00006 774 FunFam Serine/threonine-protein kinase 133 274 - -
Pral2628g00006 774 Gene3D - 4 131 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00006 Pral-Chr2628 73330 75928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00006 469 758 Receptor kinase-like Gene Family AT1G60800 41.611 3.57e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2628g00006 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00006 - - aip:107638596 971.844