Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00005 ATGGCTTTTGAAAAGCCATACCCAATTTTGCTATCTCTCTTACTTGCTTTGCTTTCGCATTCTGTAGTCTCTCAAGCTTCCAAGAACATATCCCTGGGCAGTTCACTGACTGCAGTTGAAAATGGCTCCTTCTGGCCTTCACCATCTGGTGATTTTGCATTTGGTTTCCAGAAAATTGAGAAAGATGGGTTCCTACTAGCCATCTGGTTCAACAAAATACCAGAAAAAACTGTTGTCTGGTCAGCCAAGGGACAAAATCTTGCTCCAAAGGGTTCCAAAGTTGAGCTCACTTCAGATGGTTCTTTCCAACTCGTTGATCCCACTGGTAAGCAAATTTGGAGTGCTACCCCTATAGGATTTGGAGTTTCTTATGCTGCTATGCTTGATACTGGTAACTTTGTGTTGGTTGGTCAAGGATCTCAAAATTGGTGGCAAACTTTTGATCATCCTACTGACACAATTTTACCAGGACAGGTTTTGCATCAACCTGCTCAACTTGTTTCACACTTTTCACCGAATAATTATTCAAAGGGGAGATTTATGTTTGCACTACAAGATGATGGGAATTTTGTGCTTTACACAACTGATTTCCCAGCTGATTCTGTAAATTCTGCTTATTGGAGTACCCAGGTTTTTGGCAGTGACTTCTCAGTGGTCTTTAACCAAGCTGGTCTTCTATTTGTTCAAAGAAGTAATCAAAGTATAATCCAAACAATATCATCTCTGAAGGACATCTCTGCGCAAAATCTTTACCAGAGAGCTGTTCTTGAATATGATGGAGTCTTTCGGCACTATACATATCCCAAGGGTAGTAACTCCAGTACAAGAAATCTGCCTATGGCCTGGTCAATTCAATCTGTGACACCTTCAAATATTTGTATGAGAATTAATGGACAAACAGGAGGTGGAGCTTGTGGATTCAACAGCTACTGTAACTTTGATGGTAAGAACAAAAGTTGCCACTGTCCAGTCGGTTATAGCATCATTGATCCAAATGATGTGATGAAAGGATGCAAACAAAGCTTTGTTCTACAAAGTTGTGATGAACCTTCTTCCGAAGCACACCTTTTTGATTTCATTGAGATGCCTCATATCGATTGGCCAAATTGTGACTACGAATACTTCAAACCAGTAAATGAAGATTGGTGTAGACAAGCTTGTTTAGAGGATTGCCTTTGTGTGGCTGCTTCTTTCAACGATGGGGCATGTTCCAAGAAGAACCTACCTCTCTTTAATGGAAGGTTTGATTCATCATTCCCAGGGAAAGCTCTAGTCAAAATAAGAAAAGGTAATTCCTCTACTCTGGTTCGTGGAGATATTAATCCAAAGAATGGCAAATCAAAGTTATTTGTTATTGGCTTGATACTTTTAGGCAGTTCAGTGTTCTTGATCTTGCTCTTGGTGGTGGCAGTTTGTGGGGTTTTATATTGGTTTCGCCATACTGATCAAAGGGTTCCCAAACCAGGTCGATTTGTGTCAAACATGAGCCTTATAAGTTTCACTTATGAAGAGTTACTAGAAGGCACAAATGGATTCTCAGAAGAATTGGGTCATGGTGGATTTTCTGTTGTCTACAAAGGTGTTATGCCAAATCTTCAAAAGAACTTTGTTGCAGTTAAAAAATTAAAAATGGTGGATGGAAGTGAGAAGGAATTTGAAGCAGAAGTGAGTGCAATTGGTCAAACACACCATAGGAATCTGGTGAAACTTTTGGGATTCTGTAATGAAGGAGAGCATAGGCTACTTGTGTATGAGTTCATGAGTAAAGGGACTTTAGCAAACTTTCTTTTTGAAGGCAAAAGACCAACCTGGCATCAAAGGATGCAAATTGCAATAGGTACAGCTAAAGGACTCCTGTACCTGCATGAAGAATGCACCTCTCAAATTATCCATTGTGACATCAAACCTCAAAATGTCTTGATTGATGACTCTTGTACAGCTAAAATTTCAGACTTTGGTCTGGCAAAGCTATTGAAGATTGACCAAACTGTAACTACAACAGCAATTAGGGGAACTAGAGGGTATGTGGCATCTGAGTGGTTCAAACACAAGCCAATTACTACAAAAGTGGATGTTTATAGCTTTGGAGTTTTGTTATTAGAGATCATTTGTTGCAGAAAGAACTTTGATAGGAATGTTGAAGATGAGAATAAGATGGTACTGATAGATTGGGCATGGGATTGCTTTCACTCTGGTAGATTTGACTTGTTAGTGGAAGATGATGAGGAATTGCTTACTGACATGAAGAGGGTGGAGAAGTATGTGCTGATCAGTATTTGGTGCACTCTAGAGGATCCATTACTGAGACCCACCATGAAGCAAGTTGTACTCATGCTTGAAGGATTCATGGATGTGCCAGATCCTGATGTTCTGGAATCTATTGAAAGCTAA 2391 0.3977 MAFEKPYPILLSLLLALLSHSVVSQASKNISLGSSLTAVENGSFWPSPSGDFAFGFQKIEKDGFLLAIWFNKIPEKTVVWSAKGQNLAPKGSKVELTSDGSFQLVDPTGKQIWSATPIGFGVSYAAMLDTGNFVLVGQGSQNWWQTFDHPTDTILPGQVLHQPAQLVSHFSPNNYSKGRFMFALQDDGNFVLYTTDFPADSVNSAYWSTQVFGSDFSVVFNQAGLLFVQRSNQSIIQTISSLKDISAQNLYQRAVLEYDGVFRHYTYPKGSNSSTRNLPMAWSIQSVTPSNICMRINGQTGGGACGFNSYCNFDGKNKSCHCPVGYSIIDPNDVMKGCKQSFVLQSCDEPSSEAHLFDFIEMPHIDWPNCDYEYFKPVNEDWCRQACLEDCLCVAASFNDGACSKKNLPLFNGRFDSSFPGKALVKIRKGNSSTLVRGDINPKNGKSKLFVIGLILLGSSVFLILLLVVAVCGVLYWFRHTDQRVPKPGRFVSNMSLISFTYEELLEGTNGFSEELGHGGFSVVYKGVMPNLQKNFVAVKKLKMVDGSEKEFEAEVSAIGQTHHRNLVKLLGFCNEGEHRLLVYEFMSKGTLANFLFEGKRPTWHQRMQIAIGTAKGLLYLHEECTSQIIHCDIKPQNVLIDDSCTAKISDFGLAKLLKIDQTVTTTAIRGTRGYVASEWFKHKPITTKVDVYSFGVLLLEIICCRKNFDRNVEDENKMVLIDWAWDCFHSGRFDLLVEDDEELLTDMKRVEKYVLISIWCTLEDPLLRPTMKQVVLMLEGFMDVPDPDVLESIES 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00005 796 Pfam D-mannose binding lectin 77 160 IPR001480 -
Pral2628g00005 796 CDD B_lectin 50 150 IPR001480 -
Pral2628g00005 796 FunFam Uncharacterized protein 148 242 - -
Pral2628g00005 796 PIRSF SRK 2 796 IPR024171 GO:0004674
Pral2628g00005 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 147 - -
Pral2628g00005 796 Pfam Protein kinase domain 513 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00005 796 FunFam Serine/threonine-protein kinase 151 296 - -
Pral2628g00005 796 Gene3D - 21 148 IPR036426 -
Pral2628g00005 796 SMART blect_4 36 150 IPR001480 -
Pral2628g00005 796 ProSitePatterns Protein kinases ATP-binding region signature. 516 541 IPR017441 GO:0005524
Pral2628g00005 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pral2628g00005 796 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Pral2628g00005 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 210 IPR036426 -
Pral2628g00005 796 SUPERFAMILY Protein kinase-like (PK-like) 488 780 IPR011009 -
Pral2628g00005 796 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 788 - -
Pral2628g00005 796 CDD PAN_AP_plant 343 427 - -
Pral2628g00005 796 FunFam S-receptor-like serine/threonine-protein kinase 480 586 - -
Pral2628g00005 796 Gene3D Transferase(Phosphotransferase) domain 1 587 789 - -
Pral2628g00005 796 Gene3D Phosphorylase Kinase; domain 1 479 586 - -
Pral2628g00005 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 265 IPR036426 -
Pral2628g00005 796 SMART serkin_6 510 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00005 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 787 - -
Pral2628g00005 796 Pfam PAN-like domain 359 407 IPR003609 -
Pral2628g00005 796 ProSiteProfiles Protein kinase domain profile. 510 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00005 796 Gene3D - 150 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00005 Pral-Chr2628 65935 69565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00005 442 787 Receptor kinase-like Gene Family AT1G56120 40.171 1.13e-65 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2628g00005 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00005 - - aip:107638596 978.393