Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00004 ATGGAGGCCATGGATTGGGGGAGAGAGTTGCAAAGGGTCTCTTTCGTCAATCGCACATGTGTCTTCTTTGGTCAGCGTAGTTGCTGGCTGCAATCACTCTGTAAACAAAAATACAAACTTTTCTTCGCTTGGATTTTTCCCTGGAAGGTTCTTCTCCATGGCCTTATTTATCTGCTTCACTCTGCATCAAAGCTGACTGTCTCTCAAGCTTCCAAGAACATATCCTTGGGCAGTTCACTGACTGCAGTTGAAAATGGCTCCTTCTGGTCTTCACCATCTGGTGATTTTGCATTTGGCTTCCGGAAAATTGAGAAAGATGGGTTCCTACTAGCCATCTGGTTCAACAAAATACCAGAAAAAACTATTGTCTGGTCAGCCAATGGACAAAATCTTGCTCCAAAGGGTTCCAGAGTTGAGCTCACTTCAGATGGTTCTTTCCAGCTCATTGATCCCATTACTAAGGAAATTTGGAGTGTTAGCACTAGAGTTGAAGTTTCTTATGCTGCTATGCTTGATACTGGTAACTTTGCGTTGTTTACTGAAACATCTGAAAATTTGTGGCAAAGCTTTGACCATCCCACCGACACAATTTTACCAGGACAGGTTTTGCATCAACCTGCTCAACTTGTTTCACACTTATTGCCAAATAATCATTCAAAGGGGAGATTTCTGTTTGCACTACAATATGATGGGGATTTTGTGCTTTACGCAACTGATTTCCCAACTGATTCTGTAAATTCTGCTTATTGGAGTACCCGAGTTTTTGGCAGAGACATCTCAGTGGGTAGTAACTCCAGTACAAGAAATTTGCCTATGGCCTGGTCAATTCTATCTGTGATGCCTGCAAATATTTGTAACGGAATTAATGGACGAATAGGAGGTGGAGCTTGTGGATTCAACAGCTACTGCAACTTTAATGGTACGAATAAAAGTTGTCATTGTCCAATTGGTTATAGCATTATTGATCCAAATGATGTGATGAAAGGATGCAAACAAAACTTTGTTCTACAAAGTTGTGATGAAACTTCTTCTGAAGCACACCTTTTTGATTTCATTGAGATGCCTCATATCGATTGGTCAAATTGTGACTACGAATACTTCAAACCAGTAAGTGAAGATTGGTGTAGACAAGCTTGTTTAGAGGATTGCCTTTGTGTGGCTGCTTCTTTCAACGATGGGGCATGTTCCAAGAAGAACCTACCTCTCTTTAATGGAAGGTTTGATTCATCATTCCCAGGGAAATCTCTAGTCAAAATAAGAAAAGATAATTCCTCTACTCTGGTTCGTGGAGATATTAATCCAAAGAATGGCAAATCAAAGTTATTTGTTATTGGCTTGATACTTTTAGGCAGTTCAGTATTCTTGATCTTGCTCCTGGTGGTGGCAGTTTGTGGGGTTTTATATTGGTTTTGCTGTACTAATCAAAAGGTTCCCAAAACAAGTCGATTTGTGTCAAACATGACTCTTAGAAGTTTCACTTACGAAGAGTTAATGGAAGGAACAAATGGGTTCACAGAAGAATTGGGCCGTGGTGCATTTTCTACTGTTTACAAAGGTGTTTTGCCAGACATTCCAGGAAACCTTGTTGCTGTTAAAAAACTCAAAATGGTGAATGAAAGTGAGAAGGAATTTGAAGCAGAAGTCAGCGCAATTGGTCAAACACATCATAGGAATCTGATGCAACTTTTGGGATTTTGCAATGAAGGTGAGCACAGGCTGCTTGTCTATGAATTCATGAGTAAGGGAACTTTGGCAAGTTTTCTTTTTGAAGGCAAAAGGCCAAGCTGGTATCAAAGGGTGCAAATTGCAATAGGAACAGCTAAAGGACTCTTGTACTTGCATGAAGAGTGCAAATCTCAGATTATACATTGTGATATCAAACCTCAAAATGTATTGCTTGATGACTCTTACACGGCTAAAATTTCAGATCTCGGTTTGGCAAAGCTTTTAAAGATTGACCAGACTGTAACTACAACGGCAATTAGGGGAACTAAAGGGTATGTTGCGGCTGAGTGGTTCAAAAACAAGCCGATTACCATGAAGGTGGATGTTTATAGCTTTGGAGTTCTATTAGTAGAACTCATTTGTTGCAGAAAGAGCTTTGATGTGAATGTTGAAGATGAGAATAAGATGGTGCTAATAGATTGGGCATATGATTGCTTTCACCACAGGAGATTGGACCTATTAGTGGAAGAAGATAAGGAAGCTCAAATTGACATCAGGAGTGTTGAAGAGTATGTGAAAATCGGTATCTGGTGCGTTCAAGAGGATCCATCAGCAAGACCCTCGATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGATGTGCCAAATCCTCCTAATCTAGCATCCTTTGCAAGTGAATGTTAG 2373 0.4012 MEAMDWGRELQRVSFVNRTCVFFGQRSCWLQSLCKQKYKLFFAWIFPWKVLLHGLIYLLHSASKLTVSQASKNISLGSSLTAVENGSFWSSPSGDFAFGFRKIEKDGFLLAIWFNKIPEKTIVWSANGQNLAPKGSRVELTSDGSFQLIDPITKEIWSVSTRVEVSYAAMLDTGNFALFTETSENLWQSFDHPTDTILPGQVLHQPAQLVSHLLPNNHSKGRFLFALQYDGDFVLYATDFPTDSVNSAYWSTRVFGRDISVGSNSSTRNLPMAWSILSVMPANICNGINGRIGGGACGFNSYCNFNGTNKSCHCPIGYSIIDPNDVMKGCKQNFVLQSCDETSSEAHLFDFIEMPHIDWSNCDYEYFKPVSEDWCRQACLEDCLCVAASFNDGACSKKNLPLFNGRFDSSFPGKSLVKIRKDNSSTLVRGDINPKNGKSKLFVIGLILLGSSVFLILLLVVAVCGVLYWFCCTNQKVPKTSRFVSNMTLRSFTYEELMEGTNGFTEELGRGAFSTVYKGVLPDIPGNLVAVKKLKMVNESEKEFEAEVSAIGQTHHRNLMQLLGFCNEGEHRLLVYEFMSKGTLASFLFEGKRPSWYQRVQIAIGTAKGLLYLHEECKSQIIHCDIKPQNVLLDDSYTAKISDLGLAKLLKIDQTVTTTAIRGTKGYVAAEWFKNKPITMKVDVYSFGVLLVELICCRKSFDVNVEDENKMVLIDWAYDCFHHRRLDLLVEEDKEAQIDIRSVEEYVKIGIWCVQEDPSARPSMKQVVQMLEGFMDVPNPPNLASFASEC 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00004 790 CDD PAN_AP_plant 335 419 - -
Pral2628g00004 790 Pfam Protein kinase domain 506 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00004 790 Gene3D Phosphorylase Kinase; domain 1 470 578 - -
Pral2628g00004 790 Gene3D - 67 192 IPR036426 -
Pral2628g00004 790 ProSiteProfiles Bulb-type lectin domain profile. 73 191 IPR001480 -
Pral2628g00004 790 CDD STKc_IRAK 508 774 - -
Pral2628g00004 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Pral2628g00004 790 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Pral2628g00004 790 CDD B_lectin 89 193 IPR001480 -
Pral2628g00004 790 FunFam S-receptor-like serine/threonine-protein kinase 473 578 - -
Pral2628g00004 790 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 80 782 - -
Pral2628g00004 790 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00004 790 SUPERFAMILY Protein kinase-like (PK-like) 479 772 IPR011009 -
Pral2628g00004 790 ProSitePatterns Protein kinases ATP-binding region signature. 508 533 IPR017441 GO:0005524
Pral2628g00004 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 68 191 - -
Pral2628g00004 790 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00004 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 252 IPR036426 -
Pral2628g00004 790 PIRSF SRK 267 790 IPR024171 GO:0004674
Pral2628g00004 790 PIRSF SRK 44 271 IPR024171 GO:0004674
Pral2628g00004 790 Pfam D-mannose binding lectin 121 203 IPR001480 -
Pral2628g00004 790 SMART blect_4 80 193 IPR001480 -
Pral2628g00004 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 779 - -
Pral2628g00004 790 Gene3D - 194 270 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00004 Pral-Chr2628 55169 61935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00004 484 773 Receptor kinase-like Gene Family AT1G60800 42.617 6.18e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2628g00004 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00004 - - aip:107638596 870.537