Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00003 ATGGCTTTTGAGAAGCCATATCCAATCTTCTTGTCTCTCTTGCTTGCCTTGCTTTCGCATTCTGTAGCCGCTCAAGATTCCAAGAAGATATCCTCGGGCAGTTTCCTCACTGCAGGGGAAGATGGCTCCTTCTGGCCTTCATCATCTGATGATTATGCATTTGGTTTCAAACAAATTGAGAAAACAAATGGGTTCTTAATAGCCATCTGGTTCAACAAAATTCCAGAGAACACTATCGTCTGGTCAGCCAAGCATGACACGAGTGATGCTGTTGTTGTGCCAAGGGGTTCCAAAGTTGAGATCAAACCAGATGGTTGGCTCCGATTACTTGATATCGAAGGTTCCCAGATTTGGAGTGGTGGCTATTCTGGAAGCAGTGAAGTTGCTTATGCAGAAATGCTCGATACTGGTAACTTTGTGTTGTTTGGTCAAGGATCTAAACGACTGTGGCAAAGCTTTGATCATCCCACCGATACAATTCTACCAGGACAGGTTTTAAACTCTGGTGGTGAAATTGTTTCGCAGTATTCACAAAATAATTTTTCAAGGGGGAACTTTCTGTTTAGACTCCAAGAAGATGGGGATCTTGTACTGTGGACAACCCATTATCCAACCATAGCTATAAATTTTCCCTATTGGGAGTCCAAGGTTCACGGTGATGGCTTCTCACTGGTCTTCAACCAAACAGGCTCTATATTTGTTCAGAGCAGTAATCAAAGTATAGTCGCAAATGTATCATTAAATGCTCCATCCATGCAAGATTTCTATCAAAGAGCTATTATTGATTATGATGGAGTTTTTAAGCACTATATCTATCCCAAGGGTAATAGTTCCAGTACGGGAAGTTGGCCCATGTCCTGGTCAATTCATTCCAACATACCAGAGGATATTTGCTCTGCAATTGCTGAATTTCCAGGAAGTGGAGCTTGTGGATTCAACAGCTACTGTACCTTTGAGGGTGGGATGAAAATTTGCCATTGTCCATATGGTTTTATCTTCACTGATCCAAACGATGTGATGAAAGGATGCAAACAAAACTTTGTTCAACAGAGTTGTGATGGAACTTCTTCGAAAGCACATCTCTTTAATTTGACTGAGATGCAAGATTCATGTTTTCCGCGTTCTAAATATGATTTCTTCAAACCAGTAAGTGAGGATTGGTGTAGACAATCTTGTTTAGATGATTGTCTTTGTGCACATGTTACTTTCATCGACGGGGCATGTTGGAAGGATAGCCTACCTCTCAGAAATGGAAAGATTGACTCGTCATTGGGAGGGAAATCTCTGCTTAAAATAAGAAAAGATAATTATTCTCCTTTGAATCCTGAAATTATTCATGTGAAGAATGATAGATCAAAATTGATTATTATTGGTTCAACGGTTTTAGGAAGTTCTGTATTCTTGAACTTGTTCTTGTTAGTGGCAGTTTGTGTGGTTGTATATTGCTTTGGTCACAATAATCATAGGGAGCCCAAAGTTAGTTCATTTACGTCAAGCATGAATCTTAGAAGTTTCACTTATGGAGAGTTAGTGGAAGGGACAAACGGGTTCACAGAAGAATTGGGTCGTGGTGCATTTTCTACTGTTTACAAAGGTGTTTTGCCAGACATTCCAGGAAACCTTGTTGCTGTTAAAAAACTCAAAATGGTGAATGAAAGTGAGAAGGAATTTGAAGCAGAAGTCAGCGCAATTGGTCAAACACATCATAGGAATCTGGTGCAACTTTTGGGATTTTGCAATGAAGGTGAGCACAGGCTGCTTGTCTATGAATTCATGAGTAAGGGAACTTTGGCAAGTTTTCTTTTTGAAGGCAAAAGGCCAAGCTGGTATCAAAGGGTGCAAATTGCAATAGGAACAGCTAAAGGACTCTTGTACTTGCATGAAGAGTGCAAATCTCAGATTATACATTGTGATATCAAACCTCAAAATGTATTGCTTGATGACTCTTACACGGCTAAAATTTCAGATCTCGGTTTGGCAAAGCTTTTAAAGATTGACCAGACTGTAACTACAACGGCAATTAGGGGAACTAAAGGGTATGTTGCGGCTGAGTGGTTCAAAAACAAGCCGATTACCATGAAGGTGGATGTTTATAGCTTTGGAGTTCTATTAGTAGAACTCATTTGTTGCAGAAAGAGCTTTGATGTGAATGTTGAAGATGAGAATAAGATGGTGCTAATAGATTGGGCATATGATTGCTTTCACCACAGGAGATTGGACCTATTAGTGGAAGAAGATAAGGAAGCTCAAATTGACATCAGGAGTGTTGAAGAGTATGTGAAAATCGGTATCTGGTGCGTTCAAGAGGATCCATCAGCAAGACCCTCGATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGATGTGCCAAATCCTCCTAATCTAGCATCCTTTGCAAGTGAATGTTAG 2412 0.4013 MAFEKPYPIFLSLLLALLSHSVAAQDSKKISSGSFLTAGEDGSFWPSSSDDYAFGFKQIEKTNGFLIAIWFNKIPENTIVWSAKHDTSDAVVVPRGSKVEIKPDGWLRLLDIEGSQIWSGGYSGSSEVAYAEMLDTGNFVLFGQGSKRLWQSFDHPTDTILPGQVLNSGGEIVSQYSQNNFSRGNFLFRLQEDGDLVLWTTHYPTIAINFPYWESKVHGDGFSLVFNQTGSIFVQSSNQSIVANVSLNAPSMQDFYQRAIIDYDGVFKHYIYPKGNSSSTGSWPMSWSIHSNIPEDICSAIAEFPGSGACGFNSYCTFEGGMKICHCPYGFIFTDPNDVMKGCKQNFVQQSCDGTSSKAHLFNLTEMQDSCFPRSKYDFFKPVSEDWCRQSCLDDCLCAHVTFIDGACWKDSLPLRNGKIDSSLGGKSLLKIRKDNYSPLNPEIIHVKNDRSKLIIIGSTVLGSSVFLNLFLLVAVCVVVYCFGHNNHREPKVSSFTSSMNLRSFTYGELVEGTNGFTEELGRGAFSTVYKGVLPDIPGNLVAVKKLKMVNESEKEFEAEVSAIGQTHHRNLVQLLGFCNEGEHRLLVYEFMSKGTLASFLFEGKRPSWYQRVQIAIGTAKGLLYLHEECKSQIIHCDIKPQNVLLDDSYTAKISDLGLAKLLKIDQTVTTTAIRGTKGYVAAEWFKNKPITMKVDVYSFGVLLVELICCRKSFDVNVEDENKMVLIDWAYDCFHHRRLDLLVEEDKEAQIDIRSVEEYVKIGIWCVQEDPSARPSMKQVVQMLEGFMDVPNPPNLASFASEC 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00003 803 Pfam D-mannose binding lectin 78 166 IPR001480 -
Pral2628g00003 803 Gene3D - 155 277 IPR036426 -
Pral2628g00003 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 792 - -
Pral2628g00003 803 SMART serkin_6 515 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00003 803 ProSiteProfiles Protein kinase domain profile. 515 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00003 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 215 IPR036426 -
Pral2628g00003 803 CDD B_lectin 30 156 IPR001480 -
Pral2628g00003 803 PIRSF SRK 2 803 IPR024171 GO:0004674
Pral2628g00003 803 Pfam Protein kinase domain 519 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2628g00003 803 SUPERFAMILY Protein kinase-like (PK-like) 491 785 IPR011009 -
Pral2628g00003 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 154 - -
Pral2628g00003 803 ProSiteProfiles Bulb-type lectin domain profile. 21 154 IPR001480 -
Pral2628g00003 803 FunFam S-receptor-like serine/threonine-protein kinase 485 591 - -
Pral2628g00003 803 Gene3D - 21 154 IPR036426 -
Pral2628g00003 803 SMART blect_4 27 156 IPR001480 -
Pral2628g00003 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pral2628g00003 803 CDD STKc_IRAK 521 787 - -
Pral2628g00003 803 Gene3D Phosphorylase Kinase; domain 1 480 591 - -
Pral2628g00003 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 795 - -
Pral2628g00003 803 ProSitePatterns Protein kinases ATP-binding region signature. 521 546 IPR017441 GO:0005524
Pral2628g00003 803 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00003 Pral-Chr2628 38600 41055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00003 483 786 Receptor kinase-like Gene Family AT1G60800 41.667 1.73e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2628g00003 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00003 - - aip:107638596 920.228