Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2628g00001 ATGTCTCACATAGCTGTCGAGAGGAACAGGAGAAGACAGATGAACGAGCATCTCAAAGTTTTAAGGTCTTTGACCCCTTGCTTCTATATCAAAAGGGGAGACCAAGCATCGATAATAGGGGGAGTAATAGAGTTCATCAAGGAGTTACACCAAGTTCTGGAAGTTCTGGAATCGAAGAAAAGAAGAAAGAGCGTAAGCCCTAGCCCAAGAACACCACTGCCACCACCAGCAACCTTTAATCAAGCGGACCATAGCCCCTTGAAGGAAGAAGTTGGAGCAGCAAGCTGTAATTCTTCAGTTGCAGATGTGCAAGTGAAAATCTCAGGTTCAAACGTGAATCTTAGAGTGATTTGCCACAGAATTCCAGGTCAAGTTTCAAAGATAATCAGCGTTCTTGAAAGGCTATCTTTTGAGGTCCTTCATCTCAATATCAGTAGCATGGATGATACAGTTCTATACCACTTCGTTGTCAAGATAGGGTTGGAGTGCCAGTTAAGTCTGGAGGAACTAGCAATGGGAGTACAGCAAACTTTCTGCGATCAGAAGCTGTAA 552 0.4366 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLEVLESKKRRKSVSPSPRTPLPPPATFNQADHSPLKEEVGAASCNSSVADVQVKISGSNVNLRVICHRIPGQVSKIISVLERLSFEVLHLNISSMDDTVLYHFVVKIGLECQLSLEELAMGVQQTFCDQKL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2628g00001 183 SMART finulus 4 55 IPR011598 GO:0046983
Pral2628g00001 183 SUPERFAMILY ACT-like 112 168 IPR045865 -
Pral2628g00001 183 Gene3D - 1 64 IPR036638 GO:0046983
Pral2628g00001 183 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Pral2628g00001 183 PANTHER TRANSCRIPTION FACTOR FAMA 1 178 IPR044283 GO:0003700|GO:0010052
Pral2628g00001 183 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Pral2628g00001 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 69 IPR036638 GO:0046983
Pral2628g00001 183 MobiDBLite consensus disorder prediction 60 81 - -
Pral2628g00001 183 FunFam Transcription factor MUTE 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2628g00001 Pral-Chr2628 6893 8530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2628g00001 1 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 63.131 3.11e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2628g00001 HLH 4.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2628g00001 - - pcin:129292243 286.189