Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2626g00004 ATGGCGACTGCCCCAGCTTCAGCGGAAGGAGAAAAGATGTCTCTGAAAGATCAGGGCAATGAGTTTTTCAAGTCAGGAAAGTATCTCAGAGCCGCAGCACTTTACACCCAAGCTATCAAGCAAGATCCTTCAAACCCTACTCTTTATAGTAACCGTGCAGCTGCATTGCTGCAACTGGATAAGCTTACGAAAGCTCTTGAGGATGCTGAGATGACAATAAAACTAAAACCTGAATGGGAAAAGGGGCATTTTAGGAAAGGATGTGTACTTGAGGCCATGAAACGATATGATGATGCCTTAGCTGCCTTTCAGATGGCTTTGCAGTATAACCCACAGAGTCAGGAAGTATCAAAGAAGATAAGGAAGATAAACCAGCTAGCAAAAGATAGAGATCGAGCACAAGAAGTGGAGAATAAAAGATCTAATGTTGACATGACCAAGCATTTAAACATATTGAAACCTGAATTGTCTGGAAAGTATGGATCTGAAGAATGCTGGAAAGACTTGTTTTCTTTCGTTGTTGAGACCATGGAGACAGCTGTAAAATCATGGCACGGAACTTCTACCGTGGATCCTAGAGTCTACTTCCTTCTTGATAAAGAAAAGACACAAACTGATAAATATGCCCCAGTTGTTAATATTGATAAGGCCTTTGAATCACCACATACACATGGAAGCTGTTTTTCATTTCTGAGGCAATACGCCGAGGACTCCTTTTCCAGAGCAGCTTGTTTGGTTGTTCCCAAAAGCATAATTGCTTATCCGCAGGTCTGGAAGGGCCAAGGATCAAGGAGATGGAAACATGGGCAGAATGATGGTTTCTTTGTTCAATTTGAGTCACCTTCGCTAAGAAAGCTCTGGTTTATTGCCAGTTCCAATGAAATGGGGCAGACATTATGCAGGGACCCAGAAGTCTTGGACATTGGTGCTCATGAAGTTCTTCCACGTTTATTCAAAGAAAAGCTGCCTAGTTCTTAG 978 0.4233 MATAPASAEGEKMSLKDQGNEFFKSGKYLRAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLTKALEDAEMTIKLKPEWEKGHFRKGCVLEAMKRYDDALAAFQMALQYNPQSQEVSKKIRKINQLAKDRDRAQEVENKRSNVDMTKHLNILKPELSGKYGSEECWKDLFSFVVETMETAVKSWHGTSTVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACLVVPKSIIAYPQVWKGQGSRRWKHGQNDGFFVQFESPSLRKLWFIASSNEMGQTLCRDPEVLDIGAHEVLPRLFKEKLPSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2626g00004 325 Pfam TPR repeat 19 59 - -
Pral2626g00004 325 PANTHER TPR REPEAT CONTAINING PROTEIN 5 320 - -
Pral2626g00004 325 SMART tpr_5 12 45 IPR019734 GO:0005515
Pral2626g00004 325 SMART tpr_5 80 113 IPR019734 GO:0005515
Pral2626g00004 325 SMART tpr_5 46 79 IPR019734 GO:0005515
Pral2626g00004 325 FunFam serine/threonine-protein phosphatase 5 11 125 - -
Pral2626g00004 325 Gene3D Tetratricopeptide repeat domain 11 125 IPR011990 GO:0005515
Pral2626g00004 325 Pfam Tetratricopeptide repeat 81 112 IPR001440 GO:0005515
Pral2626g00004 325 ProSiteProfiles TPR repeat profile. 12 45 IPR019734 GO:0005515
Pral2626g00004 325 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
Pral2626g00004 325 SUPERFAMILY TPR-like 14 123 IPR011990 GO:0005515
Pral2626g00004 325 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2626g00004 Pral-Chr2626 32437 38228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2626g00004 1 123 U-box Gene Family AT3G07370 30.894 3.35e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2626g00004 - - gmx:100775252 563.148