Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00014 ATGAGTTTTCATAACGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATTGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGTATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTACGTGTTGAATTATGATGATGAAGCAAAAGAGCTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTATATATGCATTATCATTGTGCTCCTCCAATTATCCATCGAGACATAACAAGCAGTAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGTGATGTTTATAGTTTCGGGATGGTGACATTAGAAACAATTATGGGAACACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTATACAGGAAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAAAAAGATGCAGGAGATATAACTCTTTTGGTCACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTGAAAGGCTTTTATCTTCCAACCTTCCATTAGCAATTCCTTTCAATAATATTTCAATCCAACATTTGGCGAATGAAGATATGCTAATAATGCAGTAA 762 0.353 MSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHYHCAPPIIHRDITSSNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGMVTLETIMGTHPGDLILSLSKTYTGSILLKDILDSRLPLPSQKDAGDITLLVTIALACLNPSPKSRPSMQQVSERLLSSNLPLAIPFNNISIQHLANEDMLIMQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00014 253 FunFam MDIS1-interacting receptor like kinase 2 38 230 - -
Pral2621g00014 253 Pfam Protein kinase domain 3 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00014 253 Gene3D Transferase(Phosphotransferase) domain 1 42 231 - -
Pral2621g00014 253 ProSitePatterns Tyrosine protein kinases specific active-site signature. 83 95 IPR008266 GO:0004672|GO:0006468
Pral2621g00014 253 SUPERFAMILY Protein kinase-like (PK-like) 2 225 IPR011009 -
Pral2621g00014 253 PANTHER LEUCINE RICH REPEAT KINASE 2 2 229 - -
Pral2621g00014 253 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00014 253 PIRSF ILK 1 230 - -
Pral2621g00014 253 Gene3D Phosphorylase Kinase; domain 1 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00014 Pral-Chr2621 178471 179546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00014 3 131 Receptor kinase-like Gene Family AT4G08850 60.465 9.69e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00014 Pkinase 9.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00014 - - pcin:129297054 415.616