Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00013 ATGCAGATAGGAGCTCTTCAAAATCTCAATTATTTGAACTTGTTTCATAACAACCTTACTAATCTCGTTCCAACTCAAATAGAAGATCTTCCACAACTCACATATCTAAACTTGTCTTACAACAATGTTGTTTCAAGTAATGAGCATGCACTGTGTCAAAGCAAATGGTGGAACTTAAGCAATGGTGGCTCCCATCACTATTGTGACTGGGATGGCATAGCATGCGATGGCGTAGGAAGAGTTATGTCAATTAACCAACCAAGAATCTATTCACAGCATCGTCAGCTAGCAGATCTCAACTTCACTGAATTAAAAAGACTAAAATACTTAAATCTTTCTAGAATGGGGATAACAGGTAGCATTCCAATTGATATGGGAGGCCTTCAAAATCTCAATCATTTGGACTTATCTTGCAACAACCTTTCAGGTATCATTCCAACTTATATTGGAGACCTTCAAAATCTCACTTATTTGGACTTGTCTTGCAACAACCTTTCAGGTATCATTCCAACTCATATAGGAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACCTTTCAGGTGGTATCCCTTATTTGATTTTCAATATGAGAGATTTACAACATTTTGATGTTTCTCAGAATCAATTAAGTGGTGGCATTCCAGAAGAATTAGGAAATTTCAATAATCGCTTTCACGTAGATGTCTCCCAAAATAATTTGAGTGGAAATGTACCGGACATTTTGAACAGTTACTTTCATGTTGATGGTAACTTTAGTCATAACAAATTCAATGGAATATTACCATCTAGTATATGTAGTGACCCACCATCATGTAGTATTGATTTGAGCTACAATAGTATCTCTGGTAGCATACCTAGGGAATTTGGCAGGCTACAATACACCAACTTGTCATACAATCTCCTTAGCGGCTATGTTCCAAGTGAAGTTTATAACTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTGGGCTAGAGAAGATACATAAAGCCTCAAAGTCTTTGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGCCATCACATTTGTTGTGGGTTTCATCTTATTTGGATCATTCAAAAAGCACAAGAAATCCATAAGTGAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTCAATATGGAACTATGATGGAAAAATTGCATATGAAGACATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGCAAAATCGTAGCATTGAAAAAACTCCATAAAAGAGAATATGGAAACAAATTTTTGGCCAAGAGTTTTCATAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATTGTAAAGCTTCATGGTTCTTGTTTGCACAATCAATGTATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAAGAGTTAAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTCCAATTATCCACCGAGACATAACAAGCAGTAACATATTGTTGAACTCAGAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAAACTATATTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACTTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGATGACATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACGTGTACAGAGAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAGGAGATATAACTCTTTTGTTCACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAACCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGCAATAA 2103 0.3576 MQIGALQNLNYLNLFHNNLTNLVPTQIEDLPQLTYLNLSYNNVVSSNEHALCQSKWWNLSNGGSHHYCDWDGIACDGVGRVMSINQPRIYSQHRQLADLNFTELKRLKYLNLSRMGITGSIPIDMGGLQNLNHLDLSCNNLSGIIPTYIGDLQNLTYLDLSCNNLSGIIPTHIGGLQNLNYLDLSCNNLSGGIPYLIFNMRDLQHFDVSQNQLSGGIPEELGNFNNRFHVDVSQNNLSGNVPDILNSYFHVDGNFSHNKFNGILPSSICSDPPSCSIDLSYNSISGSIPREFGRLQYTNLSYNLLSGYVPSEVYNSFPHDILNGNRELLGLEKIHKASKSLLKIIIPLTIFLAITFVVGFILFGSFKKHKKSISEAREAKNGDLFSIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHKREYGNKFLAKSFHNEVKMLSEIRHRNIVKLHGSCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPPIIHRDITSSNILLNSEMEAFLSDFGTARIIDPDTSNQTILVGTYGYVAPELAYTLVVTEKCDVYSFGVMTLETIMGRHPGDLILSLSKTCTESILLKDILDSRLPLPSQKDAGDITLLFTIALACLNPSPKSRPSMQQVSQRLLSSNLPLAIPFNNISIQHLANEDMPIMQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00013 700 FunFam Leucine-rich repeat receptor protein kinase MSP1 368 484 - -
Pral2621g00013 700 Gene3D Ribonuclease Inhibitor 251 337 IPR032675 -
Pral2621g00013 700 Gene3D Phosphorylase Kinase; domain 1 367 484 - -
Pral2621g00013 700 ProSitePatterns Tyrosine protein kinases specific active-site signature. 530 542 IPR008266 GO:0004672|GO:0006468
Pral2621g00013 700 PANTHER LEUCINE RICH REPEAT KINASE 2 2 676 - -
Pral2621g00013 700 PRINTS Leucine-rich repeat signature 155 168 - -
Pral2621g00013 700 PRINTS Leucine-rich repeat signature 176 189 - -
Pral2621g00013 700 SUPERFAMILY L domain-like 3 68 - -
Pral2621g00013 700 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Pral2621g00013 700 Pfam Protein kinase domain 410 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00013 700 Gene3D Ribonuclease Inhibitor 148 250 IPR032675 -
Pral2621g00013 700 FunFam Leucine-rich repeat receptor protein kinase EMS1 171 253 - -
Pral2621g00013 700 ProSiteProfiles Protein kinase domain profile. 406 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00013 700 SUPERFAMILY Protein kinase-like (PK-like) 390 672 IPR011009 -
Pral2621g00013 700 SUPERFAMILY L domain-like 64 314 - -
Pral2621g00013 700 Gene3D Ribonuclease Inhibitor 1 49 IPR032675 -
Pral2621g00013 700 Gene3D Ribonuclease Inhibitor 50 147 IPR032675 -
Pral2621g00013 700 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Pral2621g00013 700 Pfam Leucine rich repeat 5 42 IPR001611 GO:0005515
Pral2621g00013 700 SMART LRR_typ_2 30 53 IPR003591 -
Pral2621g00013 700 SMART LRR_typ_2 128 151 IPR003591 -
Pral2621g00013 700 SMART LRR_typ_2 6 29 IPR003591 -
Pral2621g00013 700 SMART LRR_typ_2 152 175 IPR003591 -
Pral2621g00013 700 SMART LRR_typ_2 176 200 IPR003591 -
Pral2621g00013 700 Gene3D Transferase(Phosphotransferase) domain 1 485 678 - -
Pral2621g00013 700 FunFam Nuclear pore complex protein NUP107 44 170 - -
Pral2621g00013 700 FunFam MDIS1-interacting receptor like kinase 2 485 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00013 Pral-Chr2621 84798 140430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00013 4 578 Receptor kinase-like Gene Family AT4G08850 36.379 2.09e-107 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00013 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00013 - - pcin:129305349 835.099