Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00012 ATGATAGAAGAGGAGAAACATGCTTTACTTCAGACCAAATGTTGGAATTTTAGCAACAGAGCCCACAACTTGTCAGACCCTTGTCACTGGGAAGGCATATCTTGCAATGATTTTGGAAGCCTTGTTGAGATGAATTATCAACAGATGACTACACAATGCTACCGTCTAGCAGATTTTAATTTCACTGCATTTCCCAATCTAGAACGTCTCACACTTTCTGAAAGGGGTTTGATAGATACCATTCCAAGTCAGATAGGATCTCTTCATAAACTTATCCATCTAAACTTATCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGCTCTTCAAAAGCTCACTTATTTGGATTTATTTGACAACAGTCTTATTGGGATCATTCCAACACAGATAGGATATCTTCAAAATCTCACTTATCTGGACTTGTCTTATAACAGTCTTACTGGGAGCATTCCATCACAGATAGGATCTCTTCATAATCTGATTGAGCTAGACTTGTCTTGTAATTGTCTTACTAATCCCGTTCCAACTCAAATAGAAGATCTTCTACAACTCACATATCTAAACTTGTCTTACAACAATATTGTTTCAAGGAATGAGCATGCATTGCTTCAAAGAAAATGGTGGAACTTAAGCAATGGTGGCTCCCACTACTATTGTGACTGGGATGGCATACCATGCGATGGCTTAGGAAGAGTTATCTTAATTAACCAACCAAGAATCTATTCACAGCATCCTCAACTAGTAGATCTCAACTTCACTGAATTAGAAAGACTAAAATACTTAAATATTTCTAGAATGGGGATAACAGGTACCATTCCAACTCACATAGGAGGTCTTCAAAATCTTAATTATTTGGACTTGTCTTGCAACAACCTTACAGGTATCATTCCAACTCATATAGCAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACTTTTCAGGTGGTATCCCTTCTTTGATTTTCAATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGTGTTCCAGAAAAATTAGAAAATTTCAACAATCACTTTCATGTAGATGTCTCCCAAAATAATTTGAATGGAAATGTACCAGACATTTTGAATGATTACTTACATGTTGATGGTAACTTTAGTCACAACAAATTCAATGGAATATTACCATCTAGTATATGCAGTGAGCCACCATCATGTAGCATTGACTTAAGCTACAACAGTATCTCTGGTAGCATACCTGGAGAATTTGGTAGACTACAATACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTACGCCAGAGAAGATACATAAAGGCTCAAAGTCTTGGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCACATTTGTTGTGGGTTTTATCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTTCATATGGAATTATGATGGAAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATAGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATCATAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACATTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATAGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAGGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTTCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACCATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAAGAAGCATTTTGCTTAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGTAA 2490 0.3558 MIEEEKHALLQTKCWNFSNRAHNLSDPCHWEGISCNDFGSLVEMNYQQMTTQCYRLADFNFTAFPNLERLTLSERGLIDTIPSQIGSLHKLIHLNLSFNNLTGIIPSQIGALQKLTYLDLFDNSLIGIIPTQIGYLQNLTYLDLSYNSLTGSIPSQIGSLHNLIELDLSCNCLTNPVPTQIEDLLQLTYLNLSYNNIVSRNEHALLQRKWWNLSNGGSHYYCDWDGIPCDGLGRVILINQPRIYSQHPQLVDLNFTELERLKYLNISRMGITGTIPTHIGGLQNLNYLDLSCNNLTGIIPTHIAGLQNLNYLDLSCNNFSGGIPSLIFNLRDLQHFDVSQNQLSGGVPEKLENFNNHFHVDVSQNNLNGNVPDILNDYLHVDGNFSHNKFNGILPSSICSEPPSCSIDLSYNSISGSIPGEFGRLQYINLSYNLLSGYVPSEVYSSFPHDILNGNRELLTPEKIHKGSKSWLKIIIPLTIFLVITFVVGFILFESFKKHKKSISKAREAKNGDLFFIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYRSVYRAQLPSGKIIALKKLHRREYGNTFLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPSIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTRSILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSQRLLSSSLPLAIPFNNISIQHLANEDMPIM 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00012 829 ProSitePatterns Tyrosine protein kinases specific active-site signature. 660 672 IPR008266 GO:0004672|GO:0006468
Pral2621g00012 829 SUPERFAMILY L domain-like 218 441 - -
Pral2621g00012 829 FunFam Nuclear pore complex protein NUP107 2 146 - -
Pral2621g00012 829 SMART LRR_sd22_2 282 308 - -
Pral2621g00012 829 SMART LRR_sd22_2 184 215 - -
Pral2621g00012 829 SMART LRR_sd22_2 330 356 - -
Pral2621g00012 829 SMART LRR_sd22_2 136 162 - -
Pral2621g00012 829 SUPERFAMILY Protein kinase-like (PK-like) 520 802 IPR011009 -
Pral2621g00012 829 ProSiteProfiles Protein kinase domain profile. 536 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00012 829 PANTHER LEUCINE RICH REPEAT KINASE 2 254 807 - -
Pral2621g00012 829 Gene3D Transferase(Phosphotransferase) domain 1 615 807 - -
Pral2621g00012 829 SUPERFAMILY L domain-like 15 200 - -
Pral2621g00012 829 ProSiteProfiles Leucine-rich repeat profile. 138 160 IPR001611 GO:0005515
Pral2621g00012 829 Gene3D Ribonuclease Inhibitor 2 151 IPR032675 -
Pral2621g00012 829 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Pral2621g00012 829 Pfam Leucine rich repeat 260 319 IPR001611 GO:0005515
Pral2621g00012 829 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pral2621g00012 829 SMART LRR_typ_2 88 112 IPR003591 -
Pral2621g00012 829 SMART LRR_typ_2 184 207 IPR003591 -
Pral2621g00012 829 SMART LRR_typ_2 282 305 IPR003591 -
Pral2621g00012 829 SMART LRR_typ_2 136 160 IPR003591 -
Pral2621g00012 829 SMART LRR_typ_2 422 446 IPR003591 -
Pral2621g00012 829 SMART LRR_typ_2 306 330 IPR003591 -
Pral2621g00012 829 FunFam Leucine-rich repeat receptor protein kinase MSP1 498 614 - -
Pral2621g00012 829 Gene3D Phosphorylase Kinase; domain 1 496 614 - -
Pral2621g00012 829 FunFam MDIS1-interacting receptor like kinase 2 615 807 - -
Pral2621g00012 829 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 249 469 - -
Pral2621g00012 829 ProSiteProfiles Leucine-rich repeat profile. 186 207 IPR001611 GO:0005515
Pral2621g00012 829 PRINTS Leucine-rich repeat signature 282 295 - -
Pral2621g00012 829 PRINTS Leucine-rich repeat signature 139 152 - -
Pral2621g00012 829 Gene3D Ribonuclease Inhibitor 382 451 IPR032675 -
Pral2621g00012 829 Gene3D Ribonuclease Inhibitor 203 325 IPR032675 -
Pral2621g00012 829 Gene3D Ribonuclease Inhibitor 152 202 IPR032675 -
Pral2621g00012 829 Gene3D Ribonuclease Inhibitor 326 381 IPR032675 -
Pral2621g00012 829 Pfam Protein kinase domain 540 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00012 Pral-Chr2621 46368 61376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00012 64 708 Receptor kinase-like Gene Family AT4G08850 36.364 3.23e-126 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00012 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00012 - - pcin:129305349 914.835