Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00011 ATGATAGAAGAGGAGAAACATGCTTTACTTCAGACCAAATGTTGGAATTTTAGCAACAGAGCCCACAACTTGTCAGACCCTTGTCACTGGGAAGGCATATCTTGCAATGATTTTGGAAGCCTTGTTGAGATGAATTATCAACAGATGACTACACAATGCTACCGTCTAGCAGATTTTAATTTCACTGCATTTCCCAATCTAGAACGTCTCACACTTTCTGAAAGGGGTTTGATAGATACCATTCCAAGTCAGATAGGATCTCTTCATAAACTTATCCATCTAAACTTATCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGCTCTTCAAAAGCTCACTTATTTGGATTTATTTGACAACAGTCTTATTGGGATCATTCCAACACAGATAGGATATCTTCAAAATCTCACTTATCTGGACTTGTCTTATAACAGTCTTACTGGGATCATTCCATCACAGATAGGATCTCTACATAATCTGATTGAACTACGCTTGTATTTCAACAGTCTTACCGGGATTATTCCATGCCAAATAGGAGCTGTTCAAAATCTCACTTATCTGGACATATCTTTCAACAGTCTTACTGGGAGCATTCCATCACAGATAGGATCTCTTCATAATCTGATTGAGCTAGACTTGTCTTGTAATTGTCTTACTAATCCCGTTCCAACTCAAATAGAAGATCTTCTACAACTCACATATCTAAACTTGTCTTACAACAATATTGTTTCAAGGAATGAGCATGCATTGCTTCAAAGAAAATGGTGGAACTTAAGCAATGGTGGCTCCCACTACTATTGTGACTGGGATGGCATACCATGCGATGGCTTAGGAAGAGTTATCTTAATTAACCAACCAAGAATCTATTCACAGCATCCTCAACTAGTAGATCTCAACTTCACTGAATTAGAAAGACTAAAATACTTAAATATTTCTAGAATGGGGATAACAGGTACCATTCCAACTCACATAGGAGGTCTTCAAAATCTTAATTATTTGGACTTGTCTTGCAACAACCTTACAGGTATCATTCCAACTCATATAGCAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACTTTTCAGGTGGTATCCCTTCTTTGATTTTCAATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGTGTTCCAGAAAAATTAGAAAATTTCAACAATCACTTTCATGTAGATGTCTCCCAAAATAATTTGAATGGAAATGTACCAGACATTTTGAATGATTACTTACATGTTGATGGTAACTTTAGTCACAACAAATTCAATGGAATATTACCATCTAGTATATGCAGTGAGCCACCATCATGTAGCATTGACTTAAGCTACAACAGTATCTCTGGTAGCATACCTGGAGAATTTGGTAGACTACAATACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTACGCCAGAGAAGATACATAAAGGCTCAAAGTCTTGGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCACATTTGTTGTGGGTTTTATCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTTCATATGGAATTATGATGGAAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATAGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATCATAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACATTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATAGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAGGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTTCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACCATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAAGAAGCATTTTGCTTAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGTAA 2634 0.3573 MIEEEKHALLQTKCWNFSNRAHNLSDPCHWEGISCNDFGSLVEMNYQQMTTQCYRLADFNFTAFPNLERLTLSERGLIDTIPSQIGSLHKLIHLNLSFNNLTGIIPSQIGALQKLTYLDLFDNSLIGIIPTQIGYLQNLTYLDLSYNSLTGIIPSQIGSLHNLIELRLYFNSLTGIIPCQIGAVQNLTYLDISFNSLTGSIPSQIGSLHNLIELDLSCNCLTNPVPTQIEDLLQLTYLNLSYNNIVSRNEHALLQRKWWNLSNGGSHYYCDWDGIPCDGLGRVILINQPRIYSQHPQLVDLNFTELERLKYLNISRMGITGTIPTHIGGLQNLNYLDLSCNNLTGIIPTHIAGLQNLNYLDLSCNNFSGGIPSLIFNLRDLQHFDVSQNQLSGGVPEKLENFNNHFHVDVSQNNLNGNVPDILNDYLHVDGNFSHNKFNGILPSSICSEPPSCSIDLSYNSISGSIPGEFGRLQYINLSYNLLSGYVPSEVYSSFPHDILNGNRELLTPEKIHKGSKSWLKIIIPLTIFLVITFVVGFILFESFKKHKKSISKAREAKNGDLFFIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYRSVYRAQLPSGKIIALKKLHRREYGNTFLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPSIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTRSILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSQRLLSSSLPLAIPFNNISIQHLANEDMPIM 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00011 877 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 306 852 - -
Pral2621g00011 877 ProSitePatterns Tyrosine protein kinases specific active-site signature. 708 720 IPR008266 GO:0004672|GO:0006468
Pral2621g00011 877 FunFam Leucine-rich repeat receptor protein kinase MSP1 546 662 - -
Pral2621g00011 877 Gene3D Ribonuclease Inhibitor 153 253 IPR032675 -
Pral2621g00011 877 SUPERFAMILY L domain-like 266 489 - -
Pral2621g00011 877 Pfam Protein kinase domain 588 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00011 877 FunFam Nuclear pore complex protein NUP107 2 154 - -
Pral2621g00011 877 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 297 517 - -
Pral2621g00011 877 FunFam Piriformospora indica-insensitive protein 2 155 250 - -
Pral2621g00011 877 SMART LRR_sd22_2 136 162 - -
Pral2621g00011 877 SMART LRR_sd22_2 232 263 - -
Pral2621g00011 877 SMART LRR_sd22_2 184 210 - -
Pral2621g00011 877 SMART LRR_sd22_2 378 404 - -
Pral2621g00011 877 SMART LRR_sd22_2 330 356 - -
Pral2621g00011 877 Gene3D Transferase(Phosphotransferase) domain 1 663 855 - -
Pral2621g00011 877 SUPERFAMILY Protein kinase-like (PK-like) 568 850 IPR011009 -
Pral2621g00011 877 FunFam MDIS1-interacting receptor like kinase 2 663 855 - -
Pral2621g00011 877 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Pral2621g00011 877 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pral2621g00011 877 Pfam Leucine rich repeat 308 367 IPR001611 GO:0005515
Pral2621g00011 877 ProSiteProfiles Leucine-rich repeat profile. 234 255 IPR001611 GO:0005515
Pral2621g00011 877 Gene3D Ribonuclease Inhibitor 2 152 IPR032675 -
Pral2621g00011 877 SUPERFAMILY L domain-like 15 247 - -
Pral2621g00011 877 SMART LRR_typ_2 88 112 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 330 353 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 354 378 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 160 183 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 184 208 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 136 159 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 470 494 IPR003591 -
Pral2621g00011 877 SMART LRR_typ_2 232 255 IPR003591 -
Pral2621g00011 877 PRINTS Leucine-rich repeat signature 330 343 - -
Pral2621g00011 877 PRINTS Leucine-rich repeat signature 139 152 - -
Pral2621g00011 877 Gene3D Phosphorylase Kinase; domain 1 544 662 - -
Pral2621g00011 877 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Pral2621g00011 877 ProSiteProfiles Protein kinase domain profile. 584 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00011 877 Gene3D Ribonuclease Inhibitor 373 429 IPR032675 -
Pral2621g00011 877 Gene3D Ribonuclease Inhibitor 254 372 IPR032675 -
Pral2621g00011 877 Gene3D Ribonuclease Inhibitor 430 499 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00011 Pral-Chr2621 46368 61376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00011 62 756 Receptor kinase-like Gene Family AT4G08850 36.138 1.00e-128 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00011 Pkinase 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00011 - - pcin:129297054 963.755