Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00010 ATGATAGAAGAGGAGAAACATGCTTTACTTCAGACCAAATGTTGGAATTTTAGCAACAGAGCCCACAACTTGTCAGACCCTTGTCACTGGGAAGGCATATCTTGCAATGATTTTGGAAGCCTTGTTGAGATGAATTATCAACAGATGACTACACAATGCTACCGTCTAGCAGATTTTAATTTCACTGCATTTCCCAATCTAGAACGTCTCACACTTTCTGAAAGGGGTTTGATAGATACCATTCCAAGTCAGATAGGATCTCTTCATAAACTTATCCATCTAAACTTATCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGCTCTTCAAAAGCTCACTTATTTGGATTTATTTGACAACAGTCTTATTGGGATCATTCCAACACAGATAGGATATCTTCAAAATCTCACTTATCTGGACTTGTCTTATAACAGTCTTACTGGGATCATTCCATCACAGATAGGATCTCTACATAATCTGATTGAACTACGCTTGTATTTCAACAGTCTTACCGGGATTATTCCATGCCAAATAGGAGCTGTTCAAAATCTCACTTATCTGGACATATCTTTCAACAGTCTTACTGGGAGCATTCCATCACAGATAGGATCTCTCCATAATCTGATTGAACTACGCTTGCATTCCAATAGTCTTACCGGGAGCATTCCATCACAGATAGGATCTCTTCATAATCTGATTGAGCTAGACTTGTCTTGTAATTGTCTTACTAATCCCGTTCCAACTCAAATAGAAGATCTTCTACAACTCACATATCTAAACTTGTCTTACAACAATATTGTTTCAAGGAATGAGCATGCATTGCTTCAAAGAAAATGGTGGAACTTAAGCAATGGTGGCTCCCACTACTATTGTGACTGGGATGGCATACCATGCGATGGCTTAGGAAGAGTTATCTTAATTAACCAACCAAGAATCTATTCACAGCATCCTCAACTAGTAGATCTCAACTTCACTGAATTAGAAAGACTAAAATACTTAAATATTTCTAGAATGGGGATAACAGGTACCATTCCAACTCACATAGGAGGTCTTCAAAATCTTAATTATTTGGACTTGTCTTGCAACAACCTTACAGGTATCATTCCAACTCATATAGCAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACTTTTCAGGTGGTATCCCTTCTTTGATTTTCAATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGTGTTCCAGAAAAATTAGAAAATTTCAACAATCACTTTCATGTAGATGTCTCCCAAAATAATTTGAATGGAAATGTACCAGACATTTTGAATGATTACTTACATGTTGATGGTAACTTTAGTCACAACAAATTCAATGGAATATTACCATCTAGTATATGCAGTGAGCCACCATCATGTAGCATTGACTTAAGCTACAACAGTATCTCTGGTAGCATACCTGGAGAATTTGGTAGACTACAATACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTACGCCAGAGAAGATACATAAAGGCTCAAAGTCTTGGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCACATTTGTTGTGGGTTTTATCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTTCATATGGAATTATGATGGAAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATAGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATCATAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACATTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATAGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAGGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTTCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACCATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAAGAAGCATTTTGCTTAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGTAA 2706 0.3592 MIEEEKHALLQTKCWNFSNRAHNLSDPCHWEGISCNDFGSLVEMNYQQMTTQCYRLADFNFTAFPNLERLTLSERGLIDTIPSQIGSLHKLIHLNLSFNNLTGIIPSQIGALQKLTYLDLFDNSLIGIIPTQIGYLQNLTYLDLSYNSLTGIIPSQIGSLHNLIELRLYFNSLTGIIPCQIGAVQNLTYLDISFNSLTGSIPSQIGSLHNLIELRLHSNSLTGSIPSQIGSLHNLIELDLSCNCLTNPVPTQIEDLLQLTYLNLSYNNIVSRNEHALLQRKWWNLSNGGSHYYCDWDGIPCDGLGRVILINQPRIYSQHPQLVDLNFTELERLKYLNISRMGITGTIPTHIGGLQNLNYLDLSCNNLTGIIPTHIAGLQNLNYLDLSCNNFSGGIPSLIFNLRDLQHFDVSQNQLSGGVPEKLENFNNHFHVDVSQNNLNGNVPDILNDYLHVDGNFSHNKFNGILPSSICSEPPSCSIDLSYNSISGSIPGEFGRLQYINLSYNLLSGYVPSEVYSSFPHDILNGNRELLTPEKIHKGSKSWLKIIIPLTIFLVITFVVGFILFESFKKHKKSISKAREAKNGDLFFIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYRSVYRAQLPSGKIIALKKLHRREYGNTFLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPSIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTRSILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSQRLLSSSLPLAIPFNNISIQHLANEDMPIM 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00010 901 Gene3D Transferase(Phosphotransferase) domain 1 687 879 - -
Pral2621g00010 901 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 321 541 - -
Pral2621g00010 901 FunFam MDIS1-interacting receptor like kinase 2 687 879 - -
Pral2621g00010 901 Gene3D Ribonuclease Inhibitor 137 210 IPR032675 -
Pral2621g00010 901 SUPERFAMILY L domain-like 15 297 - -
Pral2621g00010 901 Gene3D Phosphorylase Kinase; domain 1 568 686 - -
Pral2621g00010 901 ProSiteProfiles Leucine-rich repeat profile. 258 279 IPR001611 GO:0005515
Pral2621g00010 901 PANTHER LEUCINE RICH REPEAT KINASE 2 399 879 - -
Pral2621g00010 901 SUPERFAMILY L domain-like 290 513 - -
Pral2621g00010 901 SUPERFAMILY Protein kinase-like (PK-like) 592 874 IPR011009 -
Pral2621g00010 901 Gene3D Ribonuclease Inhibitor 211 272 IPR032675 -
Pral2621g00010 901 FunFam Leucine-rich repeat receptor protein kinase MSP1 570 686 - -
Pral2621g00010 901 FunFam Nuclear pore complex protein NUP107 2 155 - -
Pral2621g00010 901 Pfam Protein kinase domain 612 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00010 901 ProSitePatterns Tyrosine protein kinases specific active-site signature. 732 744 IPR008266 GO:0004672|GO:0006468
Pral2621g00010 901 SMART LRR_typ_2 88 112 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 208 232 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 378 402 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 160 183 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 354 377 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 256 279 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 136 159 IPR003591 -
Pral2621g00010 901 SMART LRR_typ_2 494 518 IPR003591 -
Pral2621g00010 901 Gene3D Ribonuclease Inhibitor 1 136 IPR032675 -
Pral2621g00010 901 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pral2621g00010 901 Pfam Leucine rich repeat 332 391 IPR001611 GO:0005515
Pral2621g00010 901 Pfam Leucine rich repeat 210 269 IPR001611 GO:0005515
Pral2621g00010 901 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Pral2621g00010 901 PRINTS Leucine-rich repeat signature 354 367 - -
Pral2621g00010 901 PRINTS Leucine-rich repeat signature 139 152 - -
Pral2621g00010 901 FunFam Piriformospora indica-insensitive protein 2 177 274 - -
Pral2621g00010 901 ProSiteProfiles Protein kinase domain profile. 608 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00010 901 SMART LRR_sd22_2 136 162 - -
Pral2621g00010 901 SMART LRR_sd22_2 402 428 - -
Pral2621g00010 901 SMART LRR_sd22_2 354 380 - -
Pral2621g00010 901 SMART LRR_sd22_2 256 287 - -
Pral2621g00010 901 SMART LRR_sd22_2 184 210 - -
Pral2621g00010 901 Gene3D Ribonuclease Inhibitor 273 537 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00010 Pral-Chr2621 46368 61376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00010 62 780 Receptor kinase-like Gene Family AT4G08850 37.931 7.32e-141 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00010 Pkinase 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00010 - - pcin:129297054 958.362