Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00009 ATGATAGAAGAGGAGAAACATGCTTTACTTCAGACCAAATGTTGGAATTTTAGCAACAGAGCCCACAACTTGTCAGACCCTTGTCACTGGGAAGGCATATCTTGCAATGATTTTGGAAGCCTTGTTGAGATGAATTATCAACAGATGACTACACAATGCTACCGTCTAGCAGATTTTAATTTCACTGCATTTCCCAATCTAGAACGTCTCACACTTTCTGAAAGGGGTTTGATAGATACCATTCCAAGTCAGATAGGATCTCTTCATAAACTTATCCATCTAAACTTATCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGCTCTTCAAAAGCTCACTTATTTGGATTTATTTGACAACAGTCTTATTGGGATCATTCCAACACAGATAGGATATCTTCAAAATCTCACTTATCTGGACTTGTCTTATAACAGTCTTACTGGGATCATTCCATCACAGATAGGATCTCTACATAATCTGATTGAACTACGCTTGTATTTCAACAGTCTTACCGGGATTATTCCATGCCAAATAGGAGCTGTTCAAAATCTCACTTATCTGGACATATCTTTCAACAGTCTTACTGTGATTATTCCATCCCAAATAGGAGCTCTTCAAAATCTCACTTATCTGGACATATCTTCCAACAGTCTTACTGGGAGCATTCCATCACAGATAGGATCTCTCCATAATCTGATTGAACTACGCTTGCATTCCAATAGTCTTACCGGGAGCATTCCATCACAGATAGGATCTCTTCATAATCTGATTGAGCTAGACTTGTCTTGTAATTGTCTTACTAGTACCATTCCAACTCACATAGGAGGTCTTCAAAATCTTAATTATTTGGACTTGTCTTGCAACAACCTTACAGGTATCATTCCAACTCATATAGCAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACTTTTCAGGTGGTATCCCTTCTTTGATTTTCAATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGTGTTCCAGAAAAATTAGAAAATTTCAACAATCACTTTCATGTAGATGTCTCCCAAAATAATTTGAATGGAAATGTACCAGACATTTTGAATGATTACTTACATGTTGATGGTAACTTTAGTCACAACAAATTCAATGGAATATTACCATCTAGTATATGCAGTGAGCCACCATCATGTAGCATTGACTTAAGCTACAACAGTATCTCTGGTAGCATACCTGGAGAATTTGGTAGACTACAATACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTACGCCAGAGAAGATACATAAAGGCTCAAAGTCTTGGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCACATTTGTTGTGGGTTTTATCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTTCATATGGAATTATGATGGAAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATAGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATCATAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACATTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATAGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAGGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTTCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACCATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAAGAAGCATTTTGCTTAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGTAA 2484 0.3587 MIEEEKHALLQTKCWNFSNRAHNLSDPCHWEGISCNDFGSLVEMNYQQMTTQCYRLADFNFTAFPNLERLTLSERGLIDTIPSQIGSLHKLIHLNLSFNNLTGIIPSQIGALQKLTYLDLFDNSLIGIIPTQIGYLQNLTYLDLSYNSLTGIIPSQIGSLHNLIELRLYFNSLTGIIPCQIGAVQNLTYLDISFNSLTVIIPSQIGALQNLTYLDISSNSLTGSIPSQIGSLHNLIELRLHSNSLTGSIPSQIGSLHNLIELDLSCNCLTSTIPTHIGGLQNLNYLDLSCNNLTGIIPTHIAGLQNLNYLDLSCNNFSGGIPSLIFNLRDLQHFDVSQNQLSGGVPEKLENFNNHFHVDVSQNNLNGNVPDILNDYLHVDGNFSHNKFNGILPSSICSEPPSCSIDLSYNSISGSIPGEFGRLQYINLSYNLLSGYVPSEVYSSFPHDILNGNRELLTPEKIHKGSKSWLKIIIPLTIFLVITFVVGFILFESFKKHKKSISKAREAKNGDLFFIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYRSVYRAQLPSGKIIALKKLHRREYGNTFLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPSIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTRSILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSQRLLSSSLPLAIPFNNISIQHLANEDMPIM 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00009 827 FunFam MDIS1-interacting receptor like kinase 2 613 805 - -
Pral2621g00009 827 FunFam Leucine-rich repeat receptor protein kinase MSP1 496 612 - -
Pral2621g00009 827 SUPERFAMILY L domain-like 383 439 - -
Pral2621g00009 827 ProSiteProfiles Protein kinase domain profile. 534 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00009 827 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 237 467 - -
Pral2621g00009 827 Gene3D Phosphorylase Kinase; domain 1 494 612 - -
Pral2621g00009 827 SUPERFAMILY Protein kinase-like (PK-like) 518 800 IPR011009 -
Pral2621g00009 827 Gene3D Ribonuclease Inhibitor 205 464 IPR032675 -
Pral2621g00009 827 SMART LRR_sd22_2 136 162 - -
Pral2621g00009 827 SMART LRR_sd22_2 328 354 - -
Pral2621g00009 827 SMART LRR_sd22_2 184 205 - -
Pral2621g00009 827 SMART LRR_sd22_2 280 306 - -
Pral2621g00009 827 SMART LRR_sd22_2 208 234 - -
Pral2621g00009 827 Gene3D Ribonuclease Inhibitor 1 142 IPR032675 -
Pral2621g00009 827 SMART LRR_typ_2 88 112 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 184 207 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 208 232 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 280 303 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 420 444 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 160 183 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 304 328 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 136 159 IPR003591 -
Pral2621g00009 827 SMART LRR_typ_2 256 279 IPR003591 -
Pral2621g00009 827 Gene3D Ribonuclease Inhibitor 143 204 IPR032675 -
Pral2621g00009 827 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pral2621g00009 827 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Pral2621g00009 827 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Pral2621g00009 827 Gene3D Transferase(Phosphotransferase) domain 1 613 805 - -
Pral2621g00009 827 PRINTS Leucine-rich repeat signature 139 152 - -
Pral2621g00009 827 PRINTS Leucine-rich repeat signature 208 221 - -
Pral2621g00009 827 SUPERFAMILY RNI-like 61 377 - -
Pral2621g00009 827 ProSitePatterns Tyrosine protein kinases specific active-site signature. 658 670 IPR008266 GO:0004672|GO:0006468
Pral2621g00009 827 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Pral2621g00009 827 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 39 236 - -
Pral2621g00009 827 Pfam Protein kinase domain 538 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00009 827 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 233 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00009 Pral-Chr2621 46368 61376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00009 62 706 Receptor kinase-like Gene Family AT4G08850 36.694 1.35e-135 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00009 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00009 - - pcin:129297054 879.782