Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00008 ATGATAGAAGAGGAGAAACATGCTTTACTTCAGACCAAATGTTGGAATTTTAGCAACAGAGCCCACAACTTGTCAGACCCTTGTCACTGGGAAGGCATATCTTGCAATGATTTTGGAAGCCTTGTTGAGATGAATTATCAACAGATGACTACACAATGCTACCGTCTAGCAGATTTTAATTTCACTGCATTTCCCAATCTAGAACGTCTCACACTTTCTGAAAGGGGTTTGATAGATACCATTCCAAGTCAGATAGGATCTCTTCATAAACTTATCCATCTAAACTTATCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGCTCTTCAAAAGCTCACTTATTTGGATTTATTTGACAACAGTCTTATTGGGATCATTCCAACACAGATAGGATATCTTCAAAATCTCACTTATCTGGACTTGTCTTATAACAGTCTTACTGGGATCATTCCATCACAGATAGGATCTCTACATAATCTGATTGAACTACGCTTGTATTTCAACAGTCTTACCGGGATTATTCCATGCCAAATAGGAGCTGTTCAAAATCTCACTTATCTGGACATATCTTTCAACAGTCTTACTGTGATTATTCCATCCCAAATAGGAGCTCTTCAAAATCTCACTTATCTGGACATATCTTCCAACAGTCTTACTGGGAGCATTCCATCACAGATAGGATCTCTCCATAATCTGATTGAACTACGCTTGCATTCCAATAGTCTTACCGGGAGCATTCCATCACAGATAGGATCTCTTCATAATCTGATTGAGCTAGACTTGTCTTGTAATTGTCTTACTAATCCCGTTCCAACTCAAATAGAAGATCTTCTACAACTCACATATCTAAACTTGTCTTACAACAATATTGTTTCAAGTACCATTCCAACTCACATAGGAGGTCTTCAAAATCTTAATTATTTGGACTTGTCTTGCAACAACCTTACAGGTATCATTCCAACTCATATAGCAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACTTTTCAGGTGGTATCCCTTCTTTGATTTTCAATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGTGTTCCAGAAAAATTAGAAAATTTCAACAATCACTTTCATGTAGATGTCTCCCAAAATAATTTGAATGGAAATGTACCAGACATTTTGAATGATTACTTACATGTTGATGGTAACTTTAGTCACAACAAATTCAATGGAATATTACCATCTAGTATATGCAGTGAGCCACCATCATGTAGCATTGACTTAAGCTACAACAGTATCTCTGGTAGCATACCTGGAGAATTTGGTAGACTACAATACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTACGCCAGAGAAGATACATAAAGGCTCAAAGTCTTGGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCACATTTGTTGTGGGTTTTATCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTTCATATGGAATTATGATGGAAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATAGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATCATAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACATTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATAGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAGGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTTCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACCATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAAGAAGCATTTTGCTTAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGTAA 2559 0.3576 MIEEEKHALLQTKCWNFSNRAHNLSDPCHWEGISCNDFGSLVEMNYQQMTTQCYRLADFNFTAFPNLERLTLSERGLIDTIPSQIGSLHKLIHLNLSFNNLTGIIPSQIGALQKLTYLDLFDNSLIGIIPTQIGYLQNLTYLDLSYNSLTGIIPSQIGSLHNLIELRLYFNSLTGIIPCQIGAVQNLTYLDISFNSLTVIIPSQIGALQNLTYLDISSNSLTGSIPSQIGSLHNLIELRLHSNSLTGSIPSQIGSLHNLIELDLSCNCLTNPVPTQIEDLLQLTYLNLSYNNIVSSTIPTHIGGLQNLNYLDLSCNNLTGIIPTHIAGLQNLNYLDLSCNNFSGGIPSLIFNLRDLQHFDVSQNQLSGGVPEKLENFNNHFHVDVSQNNLNGNVPDILNDYLHVDGNFSHNKFNGILPSSICSEPPSCSIDLSYNSISGSIPGEFGRLQYINLSYNLLSGYVPSEVYSSFPHDILNGNRELLTPEKIHKGSKSWLKIIIPLTIFLVITFVVGFILFESFKKHKKSISKAREAKNGDLFFIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYRSVYRAQLPSGKIIALKKLHRREYGNTFLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPSIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTRSILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSQRLLSSSLPLAIPFNNISIQHLANEDMPIM 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00008 852 SUPERFAMILY Protein kinase-like (PK-like) 543 825 IPR011009 -
Pral2621g00008 852 Gene3D Transferase(Phosphotransferase) domain 1 638 830 - -
Pral2621g00008 852 Gene3D Phosphorylase Kinase; domain 1 519 637 - -
Pral2621g00008 852 ProSiteProfiles Protein kinase domain profile. 559 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00008 852 ProSitePatterns Tyrosine protein kinases specific active-site signature. 683 695 IPR008266 GO:0004672|GO:0006468
Pral2621g00008 852 FunFam MDIS1-interacting receptor like kinase 2 638 830 - -
Pral2621g00008 852 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Pral2621g00008 852 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pral2621g00008 852 Pfam Leucine rich repeat 300 341 IPR001611 GO:0005515
Pral2621g00008 852 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Pral2621g00008 852 Gene3D Ribonuclease Inhibitor 215 489 IPR032675 -
Pral2621g00008 852 SMART LRR_sd22_2 136 162 - -
Pral2621g00008 852 SMART LRR_sd22_2 305 331 - -
Pral2621g00008 852 SMART LRR_sd22_2 184 205 - -
Pral2621g00008 852 SMART LRR_sd22_2 256 282 - -
Pral2621g00008 852 SMART LRR_sd22_2 208 234 - -
Pral2621g00008 852 SMART LRR_sd22_2 353 379 - -
Pral2621g00008 852 Pfam Protein kinase domain 563 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00008 852 FunFam Leucine-rich repeat receptor protein kinase EMS1 59 135 - -
Pral2621g00008 852 SUPERFAMILY L domain-like 408 464 - -
Pral2621g00008 852 Gene3D Ribonuclease Inhibitor 127 214 IPR032675 -
Pral2621g00008 852 Gene3D Ribonuclease Inhibitor 4 126 IPR032675 -
Pral2621g00008 852 SMART LRR_typ_2 88 112 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 184 207 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 305 328 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 232 256 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 160 183 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 445 469 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 208 231 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 136 159 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 329 353 IPR003591 -
Pral2621g00008 852 SMART LRR_typ_2 280 304 IPR003591 -
Pral2621g00008 852 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 282 827 - -
Pral2621g00008 852 SUPERFAMILY RNI-like 61 402 - -
Pral2621g00008 852 FunFam Leucine-rich repeat receptor protein kinase MSP1 521 637 - -
Pral2621g00008 852 Pfam Leucine Rich repeat 256 271 IPR001611 GO:0005515
Pral2621g00008 852 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 136 226 - -
Pral2621g00008 852 PRINTS Leucine-rich repeat signature 208 221 - -
Pral2621g00008 852 PRINTS Leucine-rich repeat signature 139 152 - -
Pral2621g00008 852 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 227 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00008 Pral-Chr2621 46368 61376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00008 4 731 Receptor kinase-like Gene Family AT4G08850 34.730 5.12e-145 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00008 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00008 - - pcin:129297054 892.878