Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00007 ATGATAGAAGAGGAGAAACATGCTTTACTTCAGACCAAATGTTGGAATTTTAGCAACAGAGCCCACAACTTGTCAGACCCTTGTCACTGGGAAGGCATATCTTGCAATGATTTTGGAAGCCTTGTTGAGATGAATTATCAACAGATGACTACACAATGCTACCGTCTAGCAGATTTTAATTTCACTGCATTTCCCAATCTAGAACGTCTCACACTTTCTGAAAGGGGTTTGATAGATACCATTCCAAGTCAGATAGGATCTCTTCATAAACTTATCCATCTAAACTTATCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGCTCTTCAAAAGCTCACTTATTTGGATTTATTTGACAACAGTCTTATTGGGATCATTCCAACACAGATAGGATATCTTCAAAATCTCACTTATCTGGACTTGTCTTATAACAGTCTTACTGGGATCATTCCATCACAGATAGGATCTCTACATAATCTGATTGAACTACGCTTGTATTTCAACAGTCTTACCGGGATTATTCCATGCCAAATAGGAGCTGTTCAAAATCTCACTTATCTGGACATATCTTTCAACAGTCTTACTGTGATTATTCCATCCCAAATAGGAGCTCTTCAAAATCTCACTTATCTGGACATATCTTCCAACAGTCTTACTGGGAGCATTCCATCACAGATAGGATCTCTCCATAATCTGATTGAACTACGCTTGCATTCCAATAGTCTTACCGGGAGCATTCCATCACAGATAGGATCTCTTCATAATCTGATTGAGCTAGACTTGTCTTGTAATTGTCTTACTAATCCCGTTCCAACTCAAATAGAAGATCTTCTACAACTCACATATCTAAACTTGTCTTACAACAATATTGTTTCAAGGAATGAGCATGCATTGCTTCAAAGAAAATGGTGGAACTTAAGCAATGGTGGCTCCCACTACTATTGTGACTGGGATGGCATACCATGCGATGGCTTAGGAAGAGTTATCTTAATTAACCAACCAAGAATCTATTCACAGCATCCTCAACTAGTAGATCTCAACTTCACTGAATTAGAAAGACTAAAATACTTAAATATTTCTAGAATGGGGATAACAGGTACCATTCCAACTCACATAGGAGGTCTTCAAAATCTTAATTATTTGGACTTGTCTTGCAACAACCTTACAGGTATCATTCCAACTCATATAGCAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACTTTTCAGGTGGTATCCCTTCTTTGATTTTCAATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGTGTTCCAGAAAAATTAGAAAATTTCAACAATCACTTTCATGTAGATGTCTCCCAAAATAATTTGAATGGAAATGTACCAGACATTTTGAATGATTACTTACATGTTGATGGTAACTTTAGTCACAACAAATTCAATGGAATATTACCATCTAGTATATGCAGTGAGCCACCATCATGTAGCATTGACTTAAGCTACAACAGTATCTCTGGTAGCATACCTGGAGAATTTGGTAGACTACAATACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTACGCCAGAGAAGATACATAAAGGCTCAAAGTCTTGGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCACATTTGTTGTGGGTTTTATCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAGAAGCAAAAAATGGGGATTTGTTTTTCATATGGAATTATGATGGAAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACTGGTGCTTATAGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATCATAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACATTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATAGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAGGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTTCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACATCTAATCAGACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACCATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAAGAAGCATTTTGCTTAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCGAATGAAGATATGCCAATAATGTAA 2778 0.3596 MIEEEKHALLQTKCWNFSNRAHNLSDPCHWEGISCNDFGSLVEMNYQQMTTQCYRLADFNFTAFPNLERLTLSERGLIDTIPSQIGSLHKLIHLNLSFNNLTGIIPSQIGALQKLTYLDLFDNSLIGIIPTQIGYLQNLTYLDLSYNSLTGIIPSQIGSLHNLIELRLYFNSLTGIIPCQIGAVQNLTYLDISFNSLTVIIPSQIGALQNLTYLDISSNSLTGSIPSQIGSLHNLIELRLHSNSLTGSIPSQIGSLHNLIELDLSCNCLTNPVPTQIEDLLQLTYLNLSYNNIVSRNEHALLQRKWWNLSNGGSHYYCDWDGIPCDGLGRVILINQPRIYSQHPQLVDLNFTELERLKYLNISRMGITGTIPTHIGGLQNLNYLDLSCNNLTGIIPTHIAGLQNLNYLDLSCNNFSGGIPSLIFNLRDLQHFDVSQNQLSGGVPEKLENFNNHFHVDVSQNNLNGNVPDILNDYLHVDGNFSHNKFNGILPSSICSEPPSCSIDLSYNSISGSIPGEFGRLQYINLSYNLLSGYVPSEVYSSFPHDILNGNRELLTPEKIHKGSKSWLKIIIPLTIFLVITFVVGFILFESFKKHKKSISKAREAKNGDLFFIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYRSVYRAQLPSGKIIALKKLHRREYGNTFLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMERGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPSIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTRSILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSQRLLSSSLPLAIPFNNISIQHLANEDMPIM 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00007 925 SUPERFAMILY L domain-like 314 537 - -
Pral2621g00007 925 SMART LRR_sd22_2 136 162 - -
Pral2621g00007 925 SMART LRR_sd22_2 184 205 - -
Pral2621g00007 925 SMART LRR_sd22_2 426 452 - -
Pral2621g00007 925 SMART LRR_sd22_2 280 311 - -
Pral2621g00007 925 SMART LRR_sd22_2 378 404 - -
Pral2621g00007 925 SMART LRR_sd22_2 208 234 - -
Pral2621g00007 925 Gene3D Ribonuclease Inhibitor 132 228 IPR032675 -
Pral2621g00007 925 SUPERFAMILY Protein kinase-like (PK-like) 616 898 IPR011009 -
Pral2621g00007 925 SUPERFAMILY L domain-like 15 321 - -
Pral2621g00007 925 ProSitePatterns Tyrosine protein kinases specific active-site signature. 756 768 IPR008266 GO:0004672|GO:0006468
Pral2621g00007 925 SMART LRR_typ_2 88 112 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 184 207 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 518 542 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 232 256 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 160 183 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 402 426 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 208 231 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 280 303 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 378 401 IPR003591 -
Pral2621g00007 925 SMART LRR_typ_2 136 159 IPR003591 -
Pral2621g00007 925 Pfam Leucine Rich repeat 256 271 IPR001611 GO:0005515
Pral2621g00007 925 PANTHER LEUCINE RICH REPEAT KINASE 2 350 903 - -
Pral2621g00007 925 FunFam MDIS1-interacting receptor like kinase 2 711 903 - -
Pral2621g00007 925 Gene3D Ribonuclease Inhibitor 231 298 IPR032675 -
Pral2621g00007 925 Pfam Protein kinase domain 636 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00007 925 Gene3D Ribonuclease Inhibitor 1 131 IPR032675 -
Pral2621g00007 925 Gene3D Ribonuclease Inhibitor 299 561 IPR032675 -
Pral2621g00007 925 ProSiteProfiles Leucine-rich repeat profile. 282 303 IPR001611 GO:0005515
Pral2621g00007 925 FunFam Leucine-rich repeat receptor protein kinase MSP1 594 710 - -
Pral2621g00007 925 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 345 565 - -
Pral2621g00007 925 Gene3D Phosphorylase Kinase; domain 1 592 710 - -
Pral2621g00007 925 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 55 310 - -
Pral2621g00007 925 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Pral2621g00007 925 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Pral2621g00007 925 Pfam Leucine rich repeat 356 415 IPR001611 GO:0005515
Pral2621g00007 925 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Pral2621g00007 925 Gene3D Transferase(Phosphotransferase) domain 1 711 903 - -
Pral2621g00007 925 ProSiteProfiles Protein kinase domain profile. 632 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2621g00007 925 PRINTS Leucine-rich repeat signature 139 152 - -
Pral2621g00007 925 PRINTS Leucine-rich repeat signature 208 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00007 Pral-Chr2621 46368 61376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00007 4 804 Receptor kinase-like Gene Family AT4G08850 36.203 2.56e-155 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2621g00007 Pkinase 4.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00007 - - pcin:129297054 956.822