Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral2621g00006 | ATGGAATACAAGACGCAATTCCCTGTTTTTTTGGATGTCCGTTTCGTTATGGCTCCTTATGAAAGGATGGTTTTTGAGCTATTCTATGACGTTGCCCCCTTTACAGCGGAAAATTTCCGTGCGTTATGTTCTGGAGAAAAAGGAGTGAGTGCTAAAACTGGAAGGCCTCTGGGGTACAAACGTAGTTTCTTTCATCCTTATAGGGAAGGTGACTCCTACATAAAGGGAGGTCTAGTTTGCTACAAAACGGGGGAATGTGGAGAAAGCATATATACTCCACGTTTCCCGGCTGACTTTAATAATCTCAAACACGATAAGGAAGGGCTTTTGTCTATGTCTAGAAGAGACCAAGAAGCTTCTAATTCTTGTTTCGTGATCACACTGGAAGCTGATCCTAGTCTTGATAGTTCTCACGTGGTCTTTGGGAAGCTTGTGGGAGGACTAGATACACTGAGAGCAATTAGAGATCATGATTTCTCTACACCGGTTAAAATCATTGATTGTGGTGTTTTATATAATGCCAAAAATATTCCTCGTGATGTGATTATGAGGCCTTGTTGTTCTGAGACTGTGTCTTCTGATACAGTGTCTTCTGAGGGAGAGCAGCAGGATTAA | 615 | 0.4195 | MEYKTQFPVFLDVRFVMAPYERMVFELFYDVAPFTAENFRALCSGEKGVSAKTGRPLGYKRSFFHPYREGDSYIKGGLVCYKTGECGESIYTPRFPADFNNLKHDKEGLLSMSRRDQEASNSCFVITLEADPSLDSSHVVFGKLVGGLDTLRAIRDHDFSTPVKIIDCGVLYNAKNIPRDVIMRPCCSETVSSDTVSSEGEQQD | 204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral2621g00006 | 204 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 189 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2621g00006 | 204 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2621g00006 | 204 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 123 | 135 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2621g00006 | 204 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 136 | 151 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2621g00006 | 204 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 108 | 123 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2621g00006 | 204 | SUPERFAMILY | Cyclophilin-like | 8 | 177 | IPR029000 | - | |
| Pral2621g00006 | 204 | Gene3D | - | 1 | 172 | IPR029000 | - | |
| Pral2621g00006 | 204 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 9 | 169 | - | - | |
| Pral2621g00006 | 204 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 21 | 170 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral2621g00006 | Pral-Chr2621 | 30416 | 32940 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral2621g00006 | 23 | 173 | U-box Gene Family | AT5G67530 | 31.646 | 1.17e-10 | 58.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral2621g00006 | K09566 | - | pcin:129288793 | 169.474 |