Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2621g00004 ATGGAATACAAGACGCAATTCCCTGTTTTTTTGGATGTCCGTTTCGTTATGGCTCCTTATGAAAGGATGGTTTTTGAGCTATTCTATGACGTTGCCCCCTTTACAGCGGAAAATTTCCGTGCGTTATGTTCTGGAGAAAAAGGAGTGAGTGCTAAAACTGGAAGGCCTCTGGGGTACAAACGTAGTTTCTTTCATCCTTATAGGGAAGGTGACTCCTACATAAAGGGAGGTCTAGTTTGCTACAAAACGGGGGAATGTGGAGAAAGCATATATACTCCACGTTTCCCGGCTGACTTTAATAATCTCAAACACGATAAGGAAGGGCTTTTGTCTATGTCTAGAAGAGACCAAGAAGCTTCTAATTCTTGTTTCGTGATCACACTGGAAGCTGATCCTAGTCTTGATAGTTCTCACGTGGTCTTTGGGAAGCTTGTGGGAGGACTAGATACACTGAGAGCAATTAGAGATCATGATTTCTCTACACCGGTTAAAATCATTGATTGTGGTGTTTTATATAATGCCAAAAATATTCCTCGTGATGTGATTATGAGGCCTTGTTGTTCTGAGACTGTGTCTTCTGATACAGTGTCTTCTGAGGGAGAGCAGCAGGATTAA 615 0.4195 MEYKTQFPVFLDVRFVMAPYERMVFELFYDVAPFTAENFRALCSGEKGVSAKTGRPLGYKRSFFHPYREGDSYIKGGLVCYKTGECGESIYTPRFPADFNNLKHDKEGLLSMSRRDQEASNSCFVITLEADPSLDSSHVVFGKLVGGLDTLRAIRDHDFSTPVKIIDCGVLYNAKNIPRDVIMRPCCSETVSSDTVSSEGEQQD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2621g00004 204 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 189 IPR002130 GO:0000413|GO:0003755
Pral2621g00004 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pral2621g00004 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Pral2621g00004 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Pral2621g00004 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 IPR002130 GO:0000413|GO:0003755
Pral2621g00004 204 SUPERFAMILY Cyclophilin-like 8 177 IPR029000 -
Pral2621g00004 204 Gene3D - 1 172 IPR029000 -
Pral2621g00004 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 169 - -
Pral2621g00004 204 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 170 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2621g00004 Pral-Chr2621 30416 32940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2621g00004 23 173 U-box Gene Family AT5G67530 31.646 1.17e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2621g00004 K09566 - pcin:129288793 169.474