Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2620g00001 ATGGAGTTTTTAGCGACCTTTTTCGGGACAGTGCTGGGTGGCATGGTGGAACCTGTTAAACGACAACTACGCTACATTCGCAACTACAAAAGCAATGTTCAGAAGCTGCAAAGTCGTGTACAGGATCTCCGTGATCGAAAGACCAGCGTCATGGCTCAAGTTGAAGAAGCTGAAAGAAATGCTGAGAACATTCACGATCCTGTCACTACCTGGTTGACGAAGACAGATGAGAAGATTGATGAAATTCAGAAGTTCCTAACTAATAAAGGCCAGAAGAGGACAAGGAGCTCCAGTGGTTCGTTTCCCAACCTATATTTAAGGCGTAAGCTTGGTAAACAAGCGCAGAAGATGGTTCAACAGTGCGATGATCTGCTGCAAGAGTCAAACTTTCCTGCCTTTTCTTACCGTCCAGAGCCAGAAGCATCAAATGTTGCTCTTCATGATGATGGTTATGAGTCATTTAAATCAAGAGATGTCATTGTGGAGCAGGTTATGAAAGCGCTGAGTGATCCCACAATTAAAATGATTGGTATCTATGGACAAGGCGGTGTCGGCAAAACCACTTTAGTTAAAGCAATTGCAAGGAAAGCTAAAGCAGAAAGGCTATTTAATGTTGTGGTTATGGCGAATATTACAACAGAACCTGATGTAAGAAGGATACAAGGAGAAATAGCGGACATGCTGGGCTTGAGATTGGATGATGAGAGCAAGAATGGACGAGCGGGTCATTTGAAACAGAGATTGAGGAAGGAGAAGGAGAACACCTTAGTCATCTTGGATGATCTTTGGGCTCGATTTGACATGAGTATGTTGGGCATTCCATTGAAGGATGATGACATCAACCAGAAAACAATAGCTAATATGCCAAATATTAGTCACAACCAATTGAAAGACGACAAGATGGCGAGTGATTCCAAATGGTTCAAGATTTTGTTGACTTCTCGACGCAAAGAGGTATTGTCAAGTGAAATGAAAGCAAGGGAGGATTCAGTTTTTAAAGTGAACGTCATGGAGGAAGAGGAATCCGAGAAGCTGTTCAACAAGGTGGTTGGAATAACCAATGAAGATTCTGAGTTGAAATCATTAGCAACTAAAATTGTTCAAAAATGTGCAAAGTTGCCGTTAGCAATAGAAGCAGCTGGAAAAGCTTTGAAGAATAGTAAGAACAAAGTCTTCTGGGGAAATGCACTGCAACGATTTGAAAGGCAAGATATGACTGAAGTATTAGGACCGGTGGAGATTTCTGTGAAGTTAAGTTATGACTTCCTACTAAGTGAAGAGAAGTCTATTTTCTTGCTTTGCGCTCATCTGGGTAATGATTCATCAATTATGTATTTGGTGAAATATTGCATCGGCTTAAGCATATTTAAAGGAGTCAATACAATAAAAGAAGCTCAAGATAGAGCAAACGAATCTATAAAGAAGTTAAAAGACTCAAGCTTGTTGTTGGATACTAATTCTCCGGATTGTATTACTATGCATGATATGATCCGTGATGCTGCCTTAATTATAGCGCACAAGGAGGAACATTTTTTTACCCAGAAATATGTCAAACTTGATGAATGGCCTAGAAAGGATACATTTGAAAAGTGCACTGTTGTCTCTTTGCAATATTGTGACATCATTGATGGGATTCCAGAAGATGTAAATTTCCCTCAACTCGAAGTCTTCCATCTTGATAGTAAAGATCCTTCCATGAAAATACCAGACAAGCTTTTTGAAGGAATGAAAGAATTGAGAGCGTTAATATTGACAGGTATTGATCTATCAAAGTTCCCTTCTTCGGTTAAATGCCTAATAAAGCTTAGAATGCTTTGTTTGGAGCAATGTGTGCTAGATGACAACATATCCATCATTGGTGAGTTGAAGAGTTTAAGAATTCTAAGCCTTTTGGGATCTAAATTTGAATTATTGCCAAGCGAATTTAGGCAATTGAGCAAGCTACAATTGTTTGACATTAGTCATTGTAGTAAACTTAAAGTGATTCCATCTAATGTAATATCAAAGTTGAATAATTTGGAAGAGTTGTACATGGGAAAAACCTTCATCCAATGGGGTGTTCAACGAAAAACAAATCCTGATGAAATTGCTACCCTTGCCGAATTGGAATCTCTTCAACAGTTGAGAAGTCTTGATATGCACATAGAAGATATTACTACTTTGCCCAGTAGCTTGGACTTTGACAAGTTGGATAGCTACAACATTGTGATTGGAGACTCTAAGATGTTTTTGTTGGAAGATTTTCATATGTCTCATCAATATAAGACTTCAAGAGTTTTGGCATTGCATCTAAAAAAAGGCGATGACATTCATTTGCAAAGAGGGATTAAAAAGTTGTTTAAAGGTGTTGAGCAATTGCTTTTAGGGGAAGTAGATGGTGTTCATTATGTTACCTATGAGTTAAATGTGGAAGGATTTCAGAATCTTAAGCATCTAACCATTAGAAAAAAATTCTGA 2457 0.3838 MEFLATFFGTVLGGMVEPVKRQLRYIRNYKSNVQKLQSRVQDLRDRKTSVMAQVEEAERNAENIHDPVTTWLTKTDEKIDEIQKFLTNKGQKRTRSSSGSFPNLYLRRKLGKQAQKMVQQCDDLLQESNFPAFSYRPEPEASNVALHDDGYESFKSRDVIVEQVMKALSDPTIKMIGIYGQGGVGKTTLVKAIARKAKAERLFNVVVMANITTEPDVRRIQGEIADMLGLRLDDESKNGRAGHLKQRLRKEKENTLVILDDLWARFDMSMLGIPLKDDDINQKTIANMPNISHNQLKDDKMASDSKWFKILLTSRRKEVLSSEMKAREDSVFKVNVMEEEESEKLFNKVVGITNEDSELKSLATKIVQKCAKLPLAIEAAGKALKNSKNKVFWGNALQRFERQDMTEVLGPVEISVKLSYDFLLSEEKSIFLLCAHLGNDSSIMYLVKYCIGLSIFKGVNTIKEAQDRANESIKKLKDSSLLLDTNSPDCITMHDMIRDAALIIAHKEEHFFTQKYVKLDEWPRKDTFEKCTVVSLQYCDIIDGIPEDVNFPQLEVFHLDSKDPSMKIPDKLFEGMKELRALILTGIDLSKFPSSVKCLIKLRMLCLEQCVLDDNISIIGELKSLRILSLLGSKFELLPSEFRQLSKLQLFDISHCSKLKVIPSNVISKLNNLEELYMGKTFIQWGVQRKTNPDEIATLAELESLQQLRSLDMHIEDITTLPSSLDFDKLDSYNIVIGDSKMFLLEDFHMSHQYKTSRVLALHLKKGDDIHLQRGIKKLFKGVEQLLLGEVDGVHYVTYELNVEGFQNLKHLTIRKKF 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2620g00001 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 434 IPR027417 -
Pral2620g00001 818 Coils Coil 459 479 - -
Pral2620g00001 818 Coils Coil 107 127 - -
Pral2620g00001 818 PRINTS Disease resistance protein signature 370 384 - -
Pral2620g00001 818 PRINTS Disease resistance protein signature 175 190 - -
Pral2620g00001 818 PRINTS Disease resistance protein signature 249 263 - -
Pral2620g00001 818 PRINTS Disease resistance protein signature 643 659 - -
Pral2620g00001 818 Coils Coil 26 60 - -
Pral2620g00001 818 Gene3D - 336 423 IPR042197 -
Pral2620g00001 818 Pfam NB-ARC domain 305 406 IPR002182 GO:0043531
Pral2620g00001 818 Pfam NB-ARC domain 160 281 IPR002182 GO:0043531
Pral2620g00001 818 Gene3D Ribonuclease Inhibitor 527 817 IPR032675 -
Pral2620g00001 818 SMART AAA_5 172 338 IPR003593 GO:0016887
Pral2620g00001 818 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 19 815 - -
Pral2620g00001 818 SUPERFAMILY L domain-like 493 725 - -
Pral2620g00001 818 Gene3D - 143 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2620g00001 Pral-Chr2620 15333 17789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2620g00001 173 508 WRKY Transcription Factor Family AT5G45050 23.256 8.27e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2620g00001 - - pcin:129288210 1105.12