Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2617g00003 ATGAAACTAAGCTGGACTCTCAATTCGTTCCTGAGTTTGATCTGGCTTTTCTTGCGTTCCACGAATGCAATCACGTACAAAGAAACGTTGGGGATGGGCCAATCACTTGGAACCTCGGATACCTTGGTGTCTGCTAACGGGAACTTCGAGCTGGGTTTTTTCACTCGAGGGAATTCGACCAAGTACTATGTAGGGATGCGGTTTAAGAAAGTTCCTAAAGACAACATTGTTTGGGTTGCAAATAGAGAGCTCGCAGCCAGCGATTCCAATGCCGTTCTCACTGTTACTGACGATGGAAATCTTGCAGTCAAGAATGACAGGATGGTGTACTTTGTCACCAACATTTCCGACATTAGCAACACCCATGTTATGCTCTTGGATTCTGGTAATCTCCTGCTGATGAACAACTCCAACTTGAACATTTTGTGGCAAAGTTTCCACAATCCCACAAATACCCTTTTGCCTGGAATGACGGTACGATCTGACGAAGGAACCAGTTGGTCGTTGACATCATGGACAAGTGTAGAAGACCCGAGTCCTGGAAATTTTTCTCTTGAAGTCGACAAGTCCATGGGGAGCGCTAGGTTAATCATCAGGAGGGAATCCGAGATATACTGGATTGGTGATGAGCAATCTAATTTCACGTTTCAAAGTATTGGTAATCGAACCTCCGCTATATGGGACACGGGCTATTTGACTTGGCAAGGGGACTACACTTCTCGGTTGGTTCTGGAAGTTTCTGGGGAGCTTAACCAGCAATTTTGGTCACAAAATACTATGCGGTGGGTTTCCTTGCTGTCATCCAAGTGCGGGAGAAACGCAATCTGTGGAAATTTTGGCATTTGTAACCCACAAGCCACTGATCCCTGTGAGTGCCTCCAAGGATTTGAGCCGTACGATGAAGATTCTTGGAAAAAGGGGGACACATCCGCAGGTTGTCGCAGAAAAACAGAGTTATGCAGTAACACGAGCAGTGATGGACTCGATGACGGCTTTTTACTAGTCGATGGAGTGGATTTTTCTTTGGATAGTCCGCTTGCGTTCAAAACTCAGAACGCATTCACATGTCAAAGAGATTGCTCAATCAATTGTTCTTGCGTCGCTTATGCTTACGATGTTACGGGTAGTTGCCTGTTCTGGCTTGATCGAGTGCTGAATCTGAAGAACATCTCGGTTGACTATGGAGATGATAATTATAGACCAAGTTTCTATCTCAAACTGGCTCGCTCTGACTTGATTAACAATGAGTTGATTAATAATCCTGATCATAACTCTAGTCTGAGCCAGAAAGCGTTGCTAACAATTGTCATACTCATCATATTTCTTGTAATGCTTGCATTAGCCCTGTTTGCATACTACTGCCGGAGGAGAAAGCTTAGGAGAGAAGGGGAGGATCTGCTAATGTTTGATACAGGCATGAGCATGAAAGTTGAGATCTCAGAGCTTACTGATGGCGATAACGTTGGAAAAGTTAACAAGAGGGATGTCAAATTGCCACTGTTTAGTTTTGCAAGTGTTTCCGCAGCAACCAATAAGTTTTCACCTGAAAATAAGCTAGGCGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAGCTGTTGAATGGGGGTGAGGTTGCTGTCAAAAGGCTATCTGCAAGATCAGGCCAAGGATGGGAGGAATTGAAAAATGAAGCAATGCTCATTGCAAAACTCCAACACAACAATCTTGTCAGGCTCTTGGGTTGCTGCGTTGAACGTGATGAAAAGATGCTTATTTATGAATTCATGCCAAACAAAAGCTTGGATGTTTTCCTTTTCGATGCAACAAAATGCAGGATTCTAGACTGGGAAACCCGAGTTCGGATAATTGATGGGATTGCCCAAGGTCTTCTTTATCTTCACCAATATTCTAGGTTTCGAATCATTCACAGAGATCTAAAAGCTAGCAATATTTTGCTGGATATCGATATGAATCCCAAAATATCAGATTTTGGTTTGGCAAGACTATTTGGTGGAAATGAATTACAAGCAAATACAAACCGGATAGTTGGTACCTACGGTTATATGTCTCCTGAGTATGCATTAGAAGGTATTTTCTCAATAAAATCAGACGTATTTAGTTTTGGAGTTCTTTTATTGGAGATAATAAGTGGAAAAAAGAATACTGGATTATATCACACAAACTCTCTCAATCTTCTTGGATATGCATGGGACCTATGGACAAGTGGGAGAGGAACAGAGCTGATGGATTCAGCGTCAGAGGATGCATCCGTACAGAAAATTGTGGTGCGAAGATACGTGAACATAGCACTGCTTTGTGTTCAAGAAAGTGCAGAAGACAGACCGACCATGTCTGATGTTGTTTCAATGCTCGGGAATGAGAATATAGTACTACCTTATCCGAAGCCCATAGCTTTCCTAAATGTAAGAGGTATCAGGACTTCAAGATCAGACGGAAGCTCAGCAGAAACTGTTTCTACCAATAACATGACTGCTTCAGTTATGGAAGCAAGATGA 2496 0.4283 MKLSWTLNSFLSLIWLFLRSTNAITYKETLGMGQSLGTSDTLVSANGNFELGFFTRGNSTKYYVGMRFKKVPKDNIVWVANRELAASDSNAVLTVTDDGNLAVKNDRMVYFVTNISDISNTHVMLLDSGNLLLMNNSNLNILWQSFHNPTNTLLPGMTVRSDEGTSWSLTSWTSVEDPSPGNFSLEVDKSMGSARLIIRRESEIYWIGDEQSNFTFQSIGNRTSAIWDTGYLTWQGDYTSRLVLEVSGELNQQFWSQNTMRWVSLLSSKCGRNAICGNFGICNPQATDPCECLQGFEPYDEDSWKKGDTSAGCRRKTELCSNTSSDGLDDGFLLVDGVDFSLDSPLAFKTQNAFTCQRDCSINCSCVAYAYDVTGSCLFWLDRVLNLKNISVDYGDDNYRPSFYLKLARSDLINNELINNPDHNSSLSQKALLTIVILIIFLVMLALALFAYYCRRRKLRREGEDLLMFDTGMSMKVEISELTDGDNVGKVNKRDVKLPLFSFASVSAATNKFSPENKLGEGGFGPVYKGKLLNGGEVAVKRLSARSGQGWEELKNEAMLIAKLQHNNLVRLLGCCVERDEKMLIYEFMPNKSLDVFLFDATKCRILDWETRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDIDMNPKISDFGLARLFGGNELQANTNRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIISGKKNTGLYHTNSLNLLGYAWDLWTSGRGTELMDSASEDASVQKIVVRRYVNIALLCVQESAEDRPTMSDVVSMLGNENIVLPYPKPIAFLNVRGIRTSRSDGSSAETVSTNNMTASVMEAR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2617g00003 831 PIRSF SRK 1 831 IPR024171 GO:0004674
Pral2617g00003 831 SUPERFAMILY Protein kinase-like (PK-like) 496 784 IPR011009 -
Pral2617g00003 831 Pfam PAN-like domain 329 386 IPR003609 -
Pral2617g00003 831 SMART blect_4 33 149 IPR001480 -
Pral2617g00003 831 Pfam Protein tyrosine and serine/threonine kinase 516 784 IPR001245 GO:0004672|GO:0006468
Pral2617g00003 831 Gene3D Phosphorylase Kinase; domain 1 488 588 - -
Pral2617g00003 831 ProSiteProfiles Protein kinase domain profile. 513 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2617g00003 831 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 112 808 - -
Pral2617g00003 831 SMART serkin_6 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2617g00003 831 FunFam Uncharacterized protein 488 588 - -
Pral2617g00003 831 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Pral2617g00003 831 MobiDBLite consensus disorder prediction 808 831 - -
Pral2617g00003 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 177 IPR036426 -
Pral2617g00003 831 CDD PAN_AP_plant 324 408 - -
Pral2617g00003 831 Pfam S-locus glycoprotein domain 228 298 IPR000858 GO:0048544
Pral2617g00003 831 ProSiteProfiles PAN/Apple domain profile. 320 403 IPR003609 -
Pral2617g00003 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 792 - -
Pral2617g00003 831 SMART ntp_6 327 402 IPR003609 -
Pral2617g00003 831 Pfam D-mannose binding lectin 76 172 IPR001480 -
Pral2617g00003 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pral2617g00003 831 Gene3D - 22 147 IPR036426 -
Pral2617g00003 831 CDD STKc_IRAK 519 784 - -
Pral2617g00003 831 Gene3D Transferase(Phosphotransferase) domain 1 589 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2617g00003 Pral-Chr2617 15967 19266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2617g00003 430 821 Receptor kinase-like Gene Family AT4G05200 50.623 2.75e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2617g00003 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2617g00003 - - pcin:129299332 1363.59