Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2617g00001 ATGAAGAACTTTATTGTACTGCTTATTTGCATTAGTTTGCTCTTTATAAGAACCTCCACTTCGTTAGACGGGATCACTCGGAGCCAGCCTTTAAGAGATGGGGAGACCTTAGTTTCAAGTGTAGGAGTATTTGCGATGGGCTTTTTCAGTCCTGGAAAATCGAAGAATCGATACTTGGGTATATGGTACAATCGTATTTCTCCTTTGACGGTGGTATGGGTGGCCAATAGAGAAGCACCAATCAGTGATGGCTCAGGAATTTTAGTATTAAACGATCTTGGAGTTCTTGCCCTGGCTGATGGCACAAATAGGACTGTTTGGTTGTCTAACAATTCTATAATGGCTGAGAAGCCAATTGTACAGCTCTTGGACACAGGAAATCTTATTATTAGTGACCAAAAATACAGTAATAAGGACCACTTCATATGGCAGAGTTTTGATTATCCCTGTGATACCTTATTGCCAGGAATGAAGCTTGGATTCAACCTAGTCACTGGTCTGAATAGGTTCCTATCTTCTTGGAAAAGTCCGGATGATCCTGGTCAAGGGGAACATATACTGAAATTAGACCCTCGAGGATATCCACAATCATTTCAATTGAGGAGAAATGTCATACATTTCAGGGCGGGATCGTGGAATGGCCTTTATTTTACTGGATATCCAGTTCAGAAACGAAATCCAGTATACAAGTCTAAGTTTATTTTCAACGATAAAGAGGCATATTATGAGTATGAACTCGTGAATAGCTCAGTTTACGCCAGAATTACAATGTCTCCTTCAGGCATTGGGAAGCGTTTAATATGGGGTAATCAAAGAGGCACATGGGAGATTATCTCAGCTAACATGGCTGATCAGTGTGACAATTATGGTTTATGCGGGGCATACTCTATCTGTGATTTCAGTAGCTCCAGGGTCTGTGAGTGCTTGAAAGGATTTGTACCAAAAAATGTGGAACAGTGGAATATATCAGATTGGTCTGGTGGGTGTGTTCGAAGTGCTCTATTGGATTGTAATAGTATAGATGGCTTCCGGAAGTATAGTGTGAAATTGCCAGACACATCTTCTTCCCAGTTTAATAAGACCATGAACCTTGAGGAATGTCAGCAATTATGTCTGAGAAACTGTTCTTGTACAGCATATGCAAATTTGGATATCCGTGATAGAGGAAGTGGCTGCTTACTTTGGTTTAAAGATCTGATTGACATGAAGCAATTAATGCAAGGAGGACAAGACATTTTTATTCGCGTCCCTGCTTCAGAGCTAGACTTTTCTGAGAACAAACGCTATGGGAACACCAATAAGGGAAAGCTCCTAGGAATCGCTGTTGCTTCTGTTACAATAAACATGGGCATGATACTTATAATTTTTGGATTGATTAGATGTGTACGGAAAAGGAAACCCAAAAGGTCAGGGATGACAAAAATATATTATAGGAATCCTTACTACAATAACTTGAGAATGGAAGACACAGAACTACAAATATTTGATTTTTCAGTCATAGCTAAAGCCACTGATAATTTTTCAAGCACCAATAAACTGGGAGAAGGTGGTTTCGGATCAGTGTACAAGGGCACTTTGGGACATGGACAAGAATTAGCCGTGAAAAGGCTATCTGAGAATTCTGTTCAAGGATTGGAAGAGTTTAGAAATGAAGTTTTGTTGATAGCCAAACTTCAACATCGTAACCTTGTGAAACTTCTTGGTTGCTGCATTGAAAGAGAAGAAAAACTGTTGATCTATGAATACATGCTGAACAAAAGTTTGGACCACTTTATTTTTGATGAATCTAGAAACAAGTTGTTGGATTGGACAAAGCGTTTCCACATTATTAATGGCATTGCTCGTGGACTTCTCTACCTTCATGAAGATTCTAGATTGAGAGTTATTCATAGAGATATGAAAACTAGCAACATTTTATTAGATACAAATTTAAACCCAAAAATATCAGACTTTGGCCTAGCTCGAACATTTTGGGGAGATCAAATTGACGCCAAAACAAAAAGGATAGCTGGAACATATGGTTACATGCCTCCTGAATATGCTGTGCATGGACATTTCTCGATAAAATCAGATGTTTTCAGCTTTGGAGTGATAGTGCTAGAGATAATAAGTGGAAAGAAAAATAGAGAATTTTCAGATTTAGAAAACTTCTTGAATCTTCTTGGATATGCATGGAGACTATGGAGAGAAGGAATGGCGATGGAATTAATGGATCAAGCCTTAGGAGAGAGATTCAATCCATCTGAAGTCATACAATGCATACAAGTGGGCCTGTTATGTGTACAACAAATACCAGAAGATAGACCCGACATGTCGTCTGTGGTTCTAATGCTGAACGGAGAGAAATCATTGCCCGACCCTCATGTTCCTGCTTTCTACATTGAAAGGAGAATACCTGAAGCAGATTCTTCCTCGGAAAAATGCAAACCTTCCTCACCAAATGAAATGTCCCTTACAACATTCGAGGCAAGATATTCAGAAGAGATTTGTCAGTATCTCTTCAACAATTGCACCCGCCTAGCCATAAGAAAAACGATGGAAAGCTTCAGAAAGCTTTCTGTGTGTTTTTTGTTACTATGCTTCACAAGCATGTCCTCCACGCTGGACATGATAACCCCAGACCAACCCCTGCGTGATGGCCAGAATAAAAGTCTGGTTTCAGATAGGGGAATCTTCGAAGCTGGATTCTTCAACCTTGCAAATTCAAAAAGCCGTTACGTGGGAATTTGGTACAAAGACATTCGCGAAAAAACGATCGTATGGGTGGCCAACAGAGAAAACCCACTCCACAGTGCCTCAGGAGTTTTGCAGATAGACAGTGATAAAGGAGTTCTTAGAATCTTGGACAGCAAAGGGATCGAAACTTGGTCCTCGAATGCATCGCAACAAGCAGAGAACCCAGTTTTGCAGCTTTTGGATTCAGGAAACCTAGTTCTGAGAGATGAAAAGAACTTGAGCAGCATACTATGGCAGAGCTTTGATTATCCAGGCGATACTTTTCTCCCTGGTATGAAAATTAGAAGCGACATAAGGACAGGTAAGTATATGGGTCTGACTTCCTGGAAGTCACTGGAAGATCCTACCCCTGGTGAGTATTCTATGCACATAGATACTAAAGGCCTTCCTCAGCTAGTTGACAAAGGAAAAAAAATGACATACAGAGCAGGACCGTGGACTGGGCTTGGTTTTACGGGGACCCCTGAATTGAGAACCATCAAATCCGTGAAATTTATTTTTGAGCTAAGTAAAGATGAAGCCTCCTATGAATATACTGTTCTGAAGAATGCAACTCTAATGAGAAGCAGACTGACGCCACAAGGATATCCACTACGTTTGACATGGTCTTCTCAGGAAAATAAATGGGAATATTTCTACCCTAGCCAGTTCGATCAGTGTGAAAGCTATGCCTTGTGTGGTCCAAATACTAATTGCACCGGCGGCACTGACCCTAATTGTAAATGCTTGACCGGATACACAGCAAGCACGTCTGGTGGGTGTGTTCGAACTACTCGACTTGGATGTGGAAGAGGAGATAGCTTTCAAAAGTACCAAAGGATGAAATTGCCGGACACATCTGCTTCCTGGTACAACACTACCATGAGTTTGCAGGAATGTGAAAAACTATGTTTGAGAAACTGCACTTGCGCGGCATATTCTAATTTGAACATCAGTGATGGAGGAAGTGGCTGCTTGCACTGGTTTAATAACATTGTCGACTTGAGAGAACTCAAAGAGGGAGGACAAGACTTCTACATTCGAGTATCTGCAGTTTCAGGCCTAGATTCTGCAGTGAAAAATGGCATGGACAAGAGGAGGCTTGCAGGAATTGTGATAGGCTGCGCTACATTAATCATCAGCATAGTAATACTCGGATTGATAATTAGGAAGAAGCTCATGCATCCAGGGAAAGCAATTTATTGGAGGGACAAGAATGACAAAGAAGACATTGATTTGCCAATATTTGAATTTTCAACCATTTCTAATGCCACAGATCAATTTTCAGAGAGGAATAAGTTGGGACAAGGTGGTTTTGGACCGGTGTACAAGGGCGTACTAGTAGATGGACAAGAGATTGCAGTAAAGAGACTCTCCAAAACATCAGGACAAGGAATGGATGAGTTTAAAAACGAAGTTTTATTGATTGCAAAACTCCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAGGGAGAAAAGTTGTTGATTTATGAATTCATGCTTAATGGAAGCTTAGACTACTTTATTTTTAATTCAACAAAAACTAAGCTACTAGATTGGACTAAACTTCATATTATTGATGGGATTGCTCGAGGCCTTCTCTATCTTCATCAAGATTCAAGATTGCGAATAATCCATAGAGATCTTAAAACCAGCAACATTCTTCTTGATATTAATATGAATCCAAAAATATCAGACTTTGGACTTGCTAGAATTTTTGGAGGAGATCAAGCTGAGGCCAACACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCAGAATATGCAGTGCATGGATCTTTTTCTGACAAATCTGATGTCTTTAGTTTTGGAGTAATGGTATTAGAGATAATAAGTGGGAAGAAGAATAGGGGATTTTGCGATCCACATTATCGTCTTAACCTTCTGGGACATGCATGGAAACTATGGATTGAAAAAAGACCCATGGACCTAATGGATGAACAACTGCAAGATTCAGTTATTTCATCCGAGCTGTTAAGATGTATTCAGGTGGGTCTATTATGTGTGCAACAAAGACCGGAGGATAGACCCAACATGTCCACTGTGATTTTAATGTTGAATGGTGAAAAGTCACTTCCTAATCCAGGAGAGCCTGGGTTCTACATTGGAAGTGATAATCAACCCTTAGCAGATTCTACTATAAGAAGCAGCGGAGAGTGTTCAATTAATGAAGCTTCCAACTCAACATTAGAGCCAAGATAG 4953 0.4014 MKNFIVLLICISLLFIRTSTSLDGITRSQPLRDGETLVSSVGVFAMGFFSPGKSKNRYLGIWYNRISPLTVVWVANREAPISDGSGILVLNDLGVLALADGTNRTVWLSNNSIMAEKPIVQLLDTGNLIISDQKYSNKDHFIWQSFDYPCDTLLPGMKLGFNLVTGLNRFLSSWKSPDDPGQGEHILKLDPRGYPQSFQLRRNVIHFRAGSWNGLYFTGYPVQKRNPVYKSKFIFNDKEAYYEYELVNSSVYARITMSPSGIGKRLIWGNQRGTWEIISANMADQCDNYGLCGAYSICDFSSSRVCECLKGFVPKNVEQWNISDWSGGCVRSALLDCNSIDGFRKYMXVKLPDTSSSQFNKTMNLEECQQLCLRNCSCTAYANLDIRDRGSGCLLWFKDLIDMKQLMQGGQDIFIRVPASELDFSENKRYGNTNKGKLLGIAVASVTINMGMILIIFGLIRCVRKRKPKRSGMTKIYYRNPYYNNLRMEDTELQIFDFSVIAKATDNFSSTNKLGEGGFGSVYKGTLGHGQELAVKRLSENSVQGLEEFRNEVLLIAKLQHRNLVKLLGCCIEREEKLLIYEYMLNKSLDHFIFDESRNKLLDWTKRFHIINGIARGLLYLHEDSRLRVIHRDMKTSNILLDTNLNPKISDFGLARTFWGDQIDAKTKRIAGTYGYMPPEYAVHGHFSIKSDVFSFGVIVLEIISGKKNREFSDLENFLNLLGYAWRLWREGMAMELMDQALGERFNPSEVIQCIQVGLLCVQQIPEDRPDMSSVVLMLNGEKSLPDPHVPAFYIERRIPEADSSSEKCKPSSPNEMSLTTFEARYSEEICQYLFNNCTRLAIRKTMESFRKLSVCFLLLCFTSMSSTLDMITPDQPLRDGQNKSLVSDRGIFEAGFFNLANSKSRYVGIWYKDIREKTIVWVANRENPLHSASGVLQIDSDKGVLRILDSKGIETWSSNASQQAENPVLQLLDSGNLVLRDEKNLSSILWQSFDYPGDTFLPGMKIRSDIRTGKYMGLTSWKSLEDPTPGEYSMHIDTKGLPQLVVXKGKKMTYRAGPWTGLGFTGTPELRTIKSVKFIFELSKDEASYEYTVLKNATLMRSRLTPQGYPLRLTWSSQENKWEYFYPSQFDQCESYALCGPNTNCTGGTDPNCKCLTGYTASTSGGCVRTTRLGCGRGDSFQKYQRMKLPDTSASWYNTTMSLQECEKLCLRNCTCAAYSNLNISDGGSGCLHWFNNIVDLRELKEGGQDFYIRVSAVSGLDSAVKNGMDKRRLAGIVIGCATLIISIVILGLIIRKKLMHPGKAIYWRDKNDKEDIDLPIFEFSTISNATDQFSERNKLGQGGFGPVYKGVLVDGQEIAVKRLSKTSGQGMDEFKNEVLLIAKLQHRNLVKLLGCSIQQGEKLLIYEFMLNGSLDYFIFNSTKTKLLDWTKRXHIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDINMNPKISDFGLARIFGGDQAEANTNRVMGTYGYMPPEYAVHGSFSDKSDVFSFGVMVLEIISGKKNRGFCDPHYRLNLLGHAWKLWIEKRPMDLMDEQLQDSVISSELLRCIQVGLLCVQQRPEDRPNMSTVILMLNGEKSLPNPGEPGFYIGSDNQPLADSTIRSSGECSINEASNSTLEPR 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2617g00001 1653 SUPERFAMILY Protein kinase-like (PK-like) 1320 1606 IPR011009 -
Pral2617g00001 1653 Gene3D Phosphorylase Kinase; domain 1 482 583 - -
Pral2617g00001 1653 Gene3D Phosphorylase Kinase; domain 1 1309 1410 - -
Pral2617g00001 1653 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Pral2617g00001 1653 CDD PAN_AP_plant 1172 1257 - -
Pral2617g00001 1653 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Pral2617g00001 1653 Gene3D Hepatocyte Growth Factor 1173 1254 - -
Pral2617g00001 1653 Gene3D Hepatocyte Growth Factor 335 415 - -
Pral2617g00001 1653 Pfam D-mannose binding lectin 919 1023 IPR001480 -
Pral2617g00001 1653 Pfam D-mannose binding lectin 70 175 IPR001480 -
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1304 1410 - -
Pral2617g00001 1653 CDD STKc_IRAK 1341 1608 - -
Pral2617g00001 1653 Gene3D Transferase(Phosphotransferase) domain 1 1411 1613 - -
Pral2617g00001 1653 Gene3D Transferase(Phosphotransferase) domain 1 584 787 - -
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 865 994 - -
Pral2617g00001 1653 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Pral2617g00001 1653 Pfam S-locus glycoprotein domain 1055 1162 IPR000858 GO:0048544
Pral2617g00001 1653 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Pral2617g00001 1653 CDD B_lectin 28 149 IPR001480 -
Pral2617g00001 1653 CDD PAN_AP_plant 335 418 - -
Pral2617g00001 1653 ProSiteProfiles PAN/Apple domain profile. 1176 1257 IPR003609 -
Pral2617g00001 1653 FunFam Os04g0303100 protein 61 205 - -
Pral2617g00001 1653 SUPERFAMILY Protein kinase-like (PK-like) 492 808 IPR011009 -
Pral2617g00001 1653 ProSiteProfiles Bulb-type lectin domain profile. 869 993 IPR001480 -
Pral2617g00001 1653 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Pral2617g00001 1653 SMART ntp_6 338 417 IPR003609 -
Pral2617g00001 1653 SMART ntp_6 1177 1256 IPR003609 -
Pral2617g00001 1653 ProSiteProfiles Protein kinase domain profile. 508 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2617g00001 1653 Pfam Protein tyrosine and serine/threonine kinase 511 776 IPR001245 GO:0004672|GO:0006468
Pral2617g00001 1653 Pfam Protein tyrosine and serine/threonine kinase 1338 1603 IPR001245 GO:0004672|GO:0006468
Pral2617g00001 1653 SMART serkin_6 508 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2617g00001 1653 SMART serkin_6 1335 1606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Pral2617g00001 1653 MobiDBLite consensus disorder prediction 1615 1653 - -
Pral2617g00001 1653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pral2617g00001 1653 Pfam PAN-like domain 337 403 IPR003609 -
Pral2617g00001 1653 Pfam PAN-like domain 1176 1242 IPR003609 -
Pral2617g00001 1653 SMART blect_4 875 997 IPR001480 -
Pral2617g00001 1653 SMART blect_4 28 149 IPR001480 -
Pral2617g00001 1653 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 770 - -
Pral2617g00001 1653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1456 1468 IPR008271 GO:0004672|GO:0006468
Pral2617g00001 1653 SUPERFAMILY alpha-D-mannose-specific plant lectins 920 1028 IPR036426 -
Pral2617g00001 1653 MobiDBLite consensus disorder prediction 1626 1653 - -
Pral2617g00001 1653 CDD STKc_IRAK 514 781 - -
Pral2617g00001 1653 ProSiteProfiles Protein kinase domain profile. 1335 1612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2617g00001 1653 CDD B_lectin 875 997 IPR001480 -
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 146 - -
Pral2617g00001 1653 Gene3D - 18 146 IPR036426 -
Pral2617g00001 1653 Gene3D - 864 994 IPR036426 -
Pral2617g00001 1653 FunFam Os04g0303100 protein 910 1054 - -
Pral2617g00001 1653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1411 1614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2617g00001 Pral-Chr2617 1261 11678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2617g00001 432 798 Receptor kinase-like Gene Family AT4G23190 51.475 6.38e-121 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2617g00001 PK_Tyr_Ser-Thr 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2617g00001 - - vum:124842963 1717.21