Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2616g00006 ATGAACATTCTTAAGAAGGCGATCAACGCCCCAGCTAGTCTCAGATGGACGGACACTGACGTCTGCAAATGGCAGCGTGTGGATTGCAACTCTGATAAACGTGTCATTGCCATCCAGATAGGGAGCTTGAATTTGCAAGGTGTGCTTCCTAAAGAACTAGAGAATCTCTCGGAGTTGCAACGATTTGAATGCCCACAGAACGGTCTCACAGGTTCAGTTCCATATCTATCCAAGACATTGCAAAAACTCGTGATCCGAGATAACAAGTTCAGCTCTGTCCCTAATGATTTCTTCAAGGAAATGACAATGTTACAAGAAGTAAGAATTGGAAACAACCCGTTTTCGCCATGGTCTATCCCAGATAGTCTCAAGGATTGTGTAGCACTTCAGACATTTGTAGCAACAAATGCAAGTTTGGTTGGAAGGATCCCAGATTTTTTAGGTACCATGCCAGGTTTAGTTTCTTTATTCCTGAATTTTAATAGTCTTGAAGGTGGCTTGCCTGCAAGCTTTGAGAATAGTTCAATCGAGGAGCTGTTGTTGAATGATCAAAATGGTAATTATAAACTTAATGGCACAATTAAGGTGCTGCAGAACATGACATCCTTAAAACAAGTTTGGCTACATGATAATTCATTTACAGGTCCAATACCAGACTTGTCACACCATGATCAGTTGTCTGATGTGAGTTTAAGGGACAATCAATTGGCTTGTGCTGTCCCATCATCTCTCATGGCTCTTCCAAGATTGCAGGTTGTGAATTTGACTAACAATTTCCTTCAAGGCCCCATTCCAACATTTAAACCGGGTGTGGTTGTTGATATGTCTGGGATTAATCGGTTTTGCACAAATATCCCGAATCAGCCATGCAATTCTGTCGTGAATGCTTTACTCTCTGTTGTTGAACCCTTAGGATGTCCTGTGAAATTGGCTGATAATTGGAAGGGCAATGATCCCTGTAATGGTAGCTGGAGCGGAATAGTGTGTGCTGGGGGTAACATTTCAATTATCAATTTCCAAAACATGGGATTGTCAGGCACTATTTCTCCCAAGTTTGCCTCCCTTGCTTCTGTCACGCAATTACTTCTTTCTAATAATTCACTCACGGGTCCTATTCCAAATGAGCTTTCTACAATGCCCAATCTGAAAAAGCTAGATGTTTCGAATAACAATTTAGGAGGTTATGTGCCATCTTTTCGTCAACCAGGTATAGAACTTAGAACAGAAGGAAATCCTGATCTTGGAAAACCTCTGAAATCACAGAGCTCAGACTCTGGAGGTAATGGTGGCCATGGGAACAACAGACTCATTGCTTTCATTGTTGGCATTGTGGTTGGCTTAGCGATTTTACTTGCTATAGCAGTTCTGGTGTTCCTTAGGTTTGTTAAGAAACGTAATTATTCAGGGAAGTTAGGAGGTCTAATAGCGAAGCTAATAGGTCCTCTTGATGGTGGAGCTGGAAAAGATATGAAGGTTAAGGTTCCAAGTCCTGGTGCTTCTGGTCAAGCTGATGTACAGGGTATGTTAATTCCAATTCAAGTTCTAAAGGAAGTCACTGACAATTTCAACAATGCAAACATACTAGGAAAGGGTGGTTTTGGCACTGTGTACAAAGGTGAACTGAATGATGGAACAAAGATTGCAGTGAAAAGAATGGAATCAGGATTGTTGATGGAGAAGGGACTGAGTGAATTCCGAGCTGAAATTTCAGTGCTTACGCAGGCCCGTCACAAACATTTGGTGGCACTTTTGGGATACTGCTTGGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCCCAAGGAGCTCTTAGTAAGCATCTGTTTAGGTGGAAAGAGAATGGGTTGGAACCTCTGGATTGGACAAGAAGACTAAACATTGCCTTGGATGTAGCTAGAGGTGTTGAGTATCTTCACGCCTTAGCTCAACAAAGTTTTATTCATCGAGATCTTAAGCCATCCAACATTCTTCTGGGCGATGATATGCGAGCTAAAGTGTCGGACTTTGGATTAGTCCGGCTTGCTCCTGAAGGAAGACATTCAGTTGAAACTAGGCTTGCTGGAACTTTCGGATATCTTGCACCTGAGTATGCAGCAACTGGGCGAGTTACCACAAAGGTTGATGTGTATAGTTTTGGAGTAGTTCTAATGGAAATGATTACGGGGAGGAGAGTGCTTGATGATAGCCTACCAGACGAAGACTTCCACCTAGTTACGTGGTTCCGGCGAATGATGCAGAACAACGATGAGTCACTTCGAAAGGCCATAGATCCTGCCATTGATGCAGATGATGAAGCAACCATGTCCAGCATTAGGACTGTCTCAGAGTTGGCTGGACATTGCTGTGCAAATGAGCCCCAGCAACGTCCTGACATGGGGCACGTAGTGAACATACTATCACCTCTTGTTCAGGCATGGAAGCCCCTGGAGTCTAGTGATGATGATACCAAGTATGGCCTTGATGATCTGCGCATGAGTTTGCCTCAAGCACTCAGAAAGTGGCAGTCTTTGGAAGGAACGAGCACAACGATGACGGAAGGACCATCAGGTTCTCAATCATTTGTCACAAAATAA 2577 0.4315 MNILKKAINAPASLRWTDTDVCKWQRVDCNSDKRVIAIQIGSLNLQGVLPKELENLSELQRFECPQNGLTGSVPYLSKTLQKLVIRDNKFSSVPNDFFKEMTMLQEVRIGNNPFSPWSIPDSLKDCVALQTFVATNASLVGRIPDFLGTMPGLVSLFLNFNSLEGGLPASFENSSIEELLLNDQNGNYKLNGTIKVLQNMTSLKQVWLHDNSFTGPIPDLSHHDQLSDVSLRDNQLACAVPSSLMALPRLQVVNLTNNFLQGPIPTFKPGVVVDMSGINRFCTNIPNQPCNSVVNALLSVVEPLGCPVKLADNWKGNDPCNGSWSGIVCAGGNISIINFQNMGLSGTISPKFASLASVTQLLLSNNSLTGPIPNELSTMPNLKKLDVSNNNLGGYVPSFRQPGIELRTEGNPDLGKPLKSQSSDSGGNGGHGNNRLIAFIVGIVVGLAILLAIAVLVFLRFVKKRNYSGKLGGLIAKLIGPLDGGAGKDMKVKVPSPGASGQADVQGMLIPIQVLKEVTDNFNNANILGKGGFGTVYKGELNDGTKIAVKRMESGLLMEKGLSEFRAEISVLTQARHKHLVALLGYCLDGNEKLLVYEYMPQGALSKHLFRWKENGLEPLDWTRRLNIALDVARGVEYLHALAQQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGRHSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDDSLPDEDFHLVTWFRRMMQNNDESLRKAIDPAIDADDEATMSSIRTVSELAGHCCANEPQQRPDMGHVVNILSPLVQAWKPLESSDDDTKYGLDDLRMSLPQALRKWQSLEGTSTTMTEGPSGSQSFVTK 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2616g00006 858 Pfam Leucine Rich Repeat 381 399 IPR001611 GO:0005515
Pral2616g00006 858 Pfam Protein tyrosine and serine/threonine kinase 525 799 IPR001245 GO:0004672|GO:0006468
Pral2616g00006 858 Gene3D Ribonuclease Inhibitor 292 417 IPR032675 -
Pral2616g00006 858 FunFam receptor protein kinase TMK1 600 819 - -
Pral2616g00006 858 Gene3D Phosphorylase Kinase; domain 1 494 599 - -
Pral2616g00006 858 FunFam receptor-like protein kinase FERONIA 491 599 - -
Pral2616g00006 858 SUPERFAMILY Protein kinase-like (PK-like) 511 817 IPR011009 -
Pral2616g00006 858 Gene3D Transferase(Phosphotransferase) domain 1 600 822 - -
Pral2616g00006 858 PANTHER OSJNBA0070M12.3 PROTEIN 1 848 - -
Pral2616g00006 858 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Pral2616g00006 858 SMART serkin_6 522 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2616g00006 858 CDD STKc_IRAK 528 803 - -
Pral2616g00006 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Pral2616g00006 858 FunFam Leucine-rich repeat receptor-like kinase 292 417 - -
Pral2616g00006 858 ProSiteProfiles Protein kinase domain profile. 522 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2616g00006 858 Pfam Leucine rich repeat N-terminal domain 4 30 IPR013210 -
Pral2616g00006 858 Pfam Leucine rich repeat N-terminal domain 312 329 IPR013210 -
Pral2616g00006 858 SUPERFAMILY L domain-like 7 397 - -
Pral2616g00006 858 MobiDBLite consensus disorder prediction 838 858 - -
Pral2616g00006 858 Gene3D Ribonuclease Inhibitor 1 285 IPR032675 -
Pral2616g00006 858 FunFam Receptor-like kinase TMK4 1 287 - -
Pral2616g00006 858 MobiDBLite consensus disorder prediction 406 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2616g00006 Pral-Chr2616 28813 31877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2616g00006 35 800 Receptor kinase-like Gene Family AT5G07280 31.818 4.06e-89 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pral2616g00006 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2616g00006 K00924 - gmx:100776064 1025.77