Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2603g00004 ATGGCGCTATGGATGGAAAAGGGTTCTGAGCCCTTGACCGAAAGCGAGAAAGCAGACCTTGATGCTATTGCTGCTCTGAAAGAGTCCGCTGCTATCGAACTCAAGGAAAAGGGCAATCAATATGTCAAAATGGGTAAAAAACATTATTCTGATGCTATTGATTGTTACACAAGGGCAATAAATCAGCAAGTCTTGAGCGACTCAGAGAACTCAGTTCTTTTGGCAAATAGAGCACATGTAAATTTGCTGCTAGGAAATTATAGACGTGCTCTAACGGATGCGGAGGAGGCAATTAAGTCGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCTGAAGCTCAATCTCACTGTCGAAATGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCGAACAGGTTGATCTAAAGAAAGCAGAAGAGGACAAGCGTGAAGCTGAAGTCTCCAAAGCTGTTGCAGGGGCAAAGGAACTTGTGTCGGCAATAGAAAGTAGAAGCTTGAAGATTGGGAAGGCAATGTTTCAAGAGCTTACCGGACTTAAAAAACCGGTATTAGACAAAAATAATATTCTTCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTTATGTCTAGTGACTTCATTGAAGATTTCTGTGAGACTGACATGTTTTCAGCTCATCTTGATATGATGTTTGCAGAAGATCAGCCTTTGCCATGGGATGATCAAAACAATTACAAACGTGAATTCATTGAATTATACTATGAGGCTGGTTCTGGAGTTTGTCTCTCAAAGGCAAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCTTCTCAGCATGAAAGTTTCGGCGATGAAGAGAAAGATGCAGCTCATGGTACTAACCATGTTAACACAGGCGCTCCTAAATGGGTCAAAGTAAATGAAAGGACGACGCTCCATGATGTTCTGAAGGACCCCAATTTTATTATCCCTGGCATCCCAGTATTCTATGTTGTTTCAAAGCGATCCAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGGCTCCCCCAAGCGTATGA 1086 0.418 MALWMEKGSEPLTESEKADLDAIAALKESAAIELKEKGNQYVKMGKKHYSDAIDCYTRAINQQVLSDSENSVLLANRAHVNLLLGNYRRALTDAEEAIKSCPSNIKAIYRAAKASLSLNLLAEAQSHCRNGLQLDPNNEELKKLGEQVDLKKAEEDKREAEVSKAVAGAKELVSAIESRSLKIGKAMFQELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFSAHLDMMFAEDQPLPWDDQNNYKREFIELYYEAGSGVCLSKAKLLHCLLEGTAASQHESFGDEEKDAAHGTNHVNTGAPKWVKVNERTTLHDVLKDPNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2603g00004 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 358 - -
Pral2603g00004 361 Gene3D Tetratricopeptide repeat domain 24 181 IPR011990 GO:0005515
Pral2603g00004 361 CDD CTWD_Cns1-like 170 353 - -
Pral2603g00004 361 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Pral2603g00004 361 SMART tpr_5 31 66 IPR019734 GO:0005515
Pral2603g00004 361 SMART tpr_5 105 138 IPR019734 GO:0005515
Pral2603g00004 361 SMART tpr_5 71 104 IPR019734 GO:0005515
Pral2603g00004 361 SUPERFAMILY TPR-like 22 143 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2603g00004 Pral-Chr2603 24747 29068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2603g00004 14 160 Calmodulin-binding Proteins AT3G25230 31.013 9.00e-08 52.0