Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2597g00006 ATGGATGAAGTTAATCAAACCTTAAAGAAGCAGATAGCAGCACTTTTGCGGGTTATCTCTGCAGCTAATTACTATAAACAGGATAATGTTCCTTGCCAAATCGAAGAGGGTCTTTTCTTGGGTTCAGTTGGCGCTGCAGCTAACAAGGATGCACTTAAAAACTTTAATGTTACTCATGTTTTAACTGTGGCTAATACTCTGACACCCGCACATCCTGATGATTTTGTATATAAAACTATAAATGTTGTTGACAGAGAGGACGCAGACATAAAACAATACTTCAACGAGTGCTTTGATTTTATTGATGAAGGAAAAAGAGTTGGAGGGACTTTAGTTCATTGCTTTGCTGGAAGATCCAGGAGTGTGACTGTAGTGGTTGCGTATCTGATGAAAACTCATCGAATGAGTTTATCTCAAGCCCTGGAGCATGTGAAGAGCAGACGACCAACGGCATCTCCCAACCTTGGTTTCATTCGACAGCTGGAGGACTTTGAAAAATCTCTTCAAGTTTCAAATTGA 519 0.4008 MDEVNQTLKKQIAALLRVISAANYYKQDNVPCQIEEGLFLGSVGAAANKDALKNFNVTHVLTVANTLTPAHPDDFVYKTINVVDREDADIKQYFNECFDFIDEGKRVGGTLVHCFAGRSRSVTVVVAYLMKTHRMSLSQALEHVKSRRPTASPNLGFIRQLEDFEKSLQVSN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2597g00006 172 Gene3D Protein tyrosine phosphatase superfamily 23 172 IPR029021 -
Pral2597g00006 172 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 169 IPR029021 -
Pral2597g00006 172 Pfam Dual specificity phosphatase, catalytic domain 38 166 IPR000340 GO:0008138|GO:0016311
Pral2597g00006 172 SMART dsp_5 30 167 IPR020422 GO:0006470|GO:0008138
Pral2597g00006 172 FunFam Dual specificity phosphatase 12 32 172 - -
Pral2597g00006 172 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 88 149 IPR000387 GO:0016311|GO:0016791
Pral2597g00006 172 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 170 IPR020422 GO:0006470|GO:0008138
Pral2597g00006 172 CDD DSP 31 163 - -
Pral2597g00006 172 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 28 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2597g00006 Pral-Chr2597 32674 35663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2597g00006 33 169 Protein tyrosine phosphatase (PTP) family AT3G06110 61.594 6.66e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2597g00006 - - pcin:129310161 324.709