Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2594g00007 ATGAAGGAGAAGAGAGTGACTAACATTTACAGGTTGGATGATCTGGACTCTAGGCTCTCTTCATCTTCTGATACTCGAGTTAAGAAAAGTGGATTTAGTATTGAGAAATTAAACCATGGTAGCCATGCAAGCACTGCAACCTCTAGGTCTTTCAAAAGAGGAATGATGAAAGGGTCTGAAGGACTGAAGTCAATTGGACGATCACTTGGATTCGGGGTATCTAAGGCAGTATTCCCTGAAGATCTAAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCCAATTGAACAAACTTTTTGTTGTCTCATGCATTTTGGCCGTGTCTGTGGATCCATTATTTTTCTATCTCCCTGTCATCGATGATCCATCTAACTGCCTTGGTATAGATCGAAAAATGGCAATCATTGTCACCACCTTGAGGACAGTTATTGATGTTTTCTATCTTATACACATGGCTCTCCAATTCCGCACTGCCTATATTGCCCCATCGTCTCGTGTCTTTGGACGGGGGGAGCTTGTGATAGATTCAACACAGATAGCCACGCGATACTTACGGCGGTATTTCATTGTTGATTTTCTATCTGTGCTGCCCTTACCACAGGTTGTGGTTTGGAGATTTCTTGAAAGATCAAAAGGCTCCGATGTATTAGCAACAAAGCAGGCCTTGCTGTTTATTATCTTACTACAGTATGTTCCTAGGTTTCTTCGGATGTTACCACTGACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGAAGGTGCTGCATATTATTTGCTGTTATACATGCTTGCCAGTCATATAGTTGGGGCTTTTTGGTACTTGTTGGCTGTTGAACGCAATGACTCATGCTGGCAGAAGGCATGTACGAATGGGTGCAAAAAGGATTTCTTGTATTGTGGTAACCAGTTTATGGAAGGTTATAATGAGTGGAACAAAACAAGTGATCAAATTCTTAAGGAACATTGCTCTGCCAAAGATGATTCGCCTTTTGATTTTGGAATTTTTAAACAAGCATTGTCATCTGGCATTATTTCATCAAAAAAGTTTGTCTCCAAATACTGTTATTGTTTATGGTGGGGCCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTGAAACCAGCACTTATCCTGGGGAAACCATCTTTTCAATAGCACTAGCCATATTTGGCCTTATCCTCTTTGCACTTCTAATTGGTAACATGCAGACGTATCTTCAATCTATTACCATAAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCACCGCTTGCTCCCACCAGAGCTGAGAGAGCGGGTTAGACGCTATGATCAATATAAGTGGTTAGCAACACGTGGTGTGGATGAAGAAAGTTTGGTTCAGACACTTCCAAAGGATCTTAGAAGAGACATCAAGCGTCACCTGTGTCTGGCTTTAGTGAGAAGGGTTCCACTGTTTGAGAGTATGGATGAGAGACTGCTTGATGCCATTTGTGAAAGACTGAAACCTTGTTTATTTACTGAGAATACTTACATTGTACGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATTCGTGGTCGACTCGAAAGTGTTACTACAGATGGTGGTAGAAGCGGATTTTTCAACCGTGGTTTCCTTAAAGAGACTGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCACTGGATCCTAGATCTGGTTCTAATCTCCCAACTTCTACTCGAACAGTTAAGGCATTAACAGAGGTTGAATGTTTCGCCTTGATCGCAGATGAGTTAAAATTCGTTGCTAGTCAGTTTAGGCGCCTTCATAGTAGACAGGTTCAACACACATTCCGGTTCTACTCACAGCAATGGAGGACATGGGCTGCCTGCTTTATTCAAGCAGCATGGCGGCGATATTCTAAAAGGAAGGCCATGGAGCTTCGTCGAAAGGAAGAACCTGAGGAGTCAGAAGGAACTCAAAGTAATGTTAGTGGCAGTTCATACAGCATTGGTGCTACCTTCTTAGCTTCAAGGTTTGCAGCCAATGCTCTTCGGGGCATACATCGCAATCGGAATGCTAAGACTGCGAGGGAGTTGGTGAAACTACAAAAACCTCCAGAACCTGACTTTACTGCTGATGATGCAGATTAA 2166 0.4261 MKEKRVTNIYRLDDLDSRLSSSSDTRVKKSGFSIEKLNHGSHASTATSRSFKRGMMKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLQLNKLFVVSCILAVSVDPLFFYLPVIDDPSNCLGIDRKMAIIVTTLRTVIDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSTQIATRYLRRYFIVDFLSVLPLPQVVVWRFLERSKGSDVLATKQALLFIILLQYVPRFLRMLPLTSELKRTAGVFAETAWEGAAYYLLLYMLASHIVGAFWYLLAVERNDSCWQKACTNGCKKDFLYCGNQFMEGYNEWNKTSDQILKEHCSAKDDSPFDFGIFKQALSSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLETSTYPGETIFSIALAIFGLILFALLIGNMQTYLQSITIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLATRGVDEESLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKETDFCGEELLTWALDPRSGSNLPTSTRTVKALTEVECFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMELRRKEEPEESEGTQSNVSGSSYSIGATFLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTADDAD 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2594g00007 721 SUPERFAMILY cAMP-binding domain-like 423 613 IPR018490 -
Pral2594g00007 721 ProSiteProfiles IQ motif profile. 630 659 IPR000048 GO:0005515
Pral2594g00007 721 Pfam Cyclic nucleotide-binding domain 515 604 IPR000595 -
Pral2594g00007 721 SMART cnmp_10 494 625 IPR000595 -
Pral2594g00007 721 FunFam Cyclic nucleotide-gated ion channel 1 421 485 - -
Pral2594g00007 721 SUPERFAMILY Voltage-gated potassium channels 92 416 - -
Pral2594g00007 721 Gene3D Helix hairpin bin 422 485 - -
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 363 380 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 156 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 273 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 407 416 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 145 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 389 400 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 PRINTS EAG/ELK/ERG potassium channel family signature 457 464 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2594g00007 721 Gene3D Jelly Rolls 492 612 IPR014710 -
Pral2594g00007 721 CDD CAP_ED 494 625 IPR000595 -
Pral2594g00007 721 MobiDBLite consensus disorder prediction 701 721 - -
Pral2594g00007 721 ProSiteProfiles cAMP/cGMP binding motif profile. 494 578 IPR000595 -
Pral2594g00007 721 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 715 - -
Pral2594g00007 721 FunFam Cyclic nucleotide-gated ion channel 1 492 610 - -
Pral2594g00007 721 Gene3D - 102 419 - -
Pral2594g00007 721 Pfam Ion transport protein 101 420 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2594g00007 Pral-Chr2594 29459 39507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2594g00007 18 718 Ion Channels AT5G57940 78.754 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2594g00007 K05391 - gmx:100820202 1202.19