Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2592g00001 ATGACAGAGGAGGAGAAACTCCCTGTTTTTATGGACGTCTTTATAGCCGGGATGTACTATGAAAGGATGGTTTTTGAGCTATTCTATGACATTGCCCCCTACACTGCAGAAGATTTCCGTGCGCTTTGTACAGGAGAAAAAGGAGTCAGTCCAAATGATACGTTTTTGTGTTACGCAAATTGTTTCTTTCACAAGGTTAAGAAAGGTGGCTCCTATGTGAAGGGAGGCGCCATAAACTACGAAACTGGGGAAGATGTTCAAAGTGTTTTTGGTCCATATTTCTTTGACGATGGGTCAAATAACTTGAAACATGACAAGGAAGGGCTCCTATCTATGCCCAGAAGAGACTTCAGAGATTGCCGTTCTCACTTTTTGATCACATTGAGAGCTGATGAGAGCCTTGACAGGACTCATGTGGTCACCGGGAAGCTTGTGGAAGGCATGGATACACTACGAGAAATCGGACAGACTAGTTTTGACTGGGCGGTTAGAATTGTTGATTGTGGCATGTTATATAATGCTAGGGATATTCCTCCTGGAGTGATTATTAGGCCTTTGCCGCGTGGAAAGAGGGATGGGGTCTCCTCAAAGGGCAGGGAAAGACGTGAGGGAAGGAGAAAGAGGATAAAGAACGATGATCGGGATGACTCAAAGGGCAAGGAAAGACGTGAGGGAAGGAGGAGGAGGATAAAGGGGGATGGTCGGGATGACTATTGA 717 0.4561 MTEEEKLPVFMDVFIAGMYYERMVFELFYDIAPYTAEDFRALCTGEKGVSPNDTFLCYANCFFHKVKKGGSYVKGGAINYETGEDVQSVFGPYFFDDGSNNLKHDKEGLLSMPRRDFRDCRSHFLITLRADESLDRTHVVTGKLVEGMDTLREIGQTSFDWAVRIVDCGMLYNARDIPPGVIIRPLPRGKRDGVSSKGRERREGRRKRIKNDDRDDSKGKERREGRRRRIKGDGRDDY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2592g00001 238 MobiDBLite consensus disorder prediction 190 238 - -
Pral2592g00001 238 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 160 IPR002130 GO:0000413|GO:0003755
Pral2592g00001 238 SUPERFAMILY Cyclophilin-like 9 176 IPR029000 -
Pral2592g00001 238 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 169 IPR002130 GO:0000413|GO:0003755
Pral2592g00001 238 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Pral2592g00001 238 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pral2592g00001 238 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Pral2592g00001 238 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 169 - -
Pral2592g00001 238 MobiDBLite consensus disorder prediction 185 238 - -
Pral2592g00001 238 Gene3D - 1 177 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2592g00001 Pral-Chr2592 14187 17887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2592g00001 25 173 U-box Gene Family AT5G67530 25.806 3.93e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2592g00001 K09566 - pcin:129288793 149.058