Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2590g00001 ATGGACAAGGTGGTATCAAACCAAGTTGCAGATCTTCATGATTTATCGTCTTGTGCAACAATGGGACTGGTTACAGTCATCTGTGTTGATGCATCTGGTGGGCTAATGTCTAAACCGATGGAGGTTAGTAGAATTCGGATTGGGGAGAGAGATATCAGCAATGATATGACATCAGAAATTAATGAAGTTGTGCTCGACAAACTTAAGCAAGGAGCCAGCGTATCTGTTCTTGCCCCGGAGTTTATTCTTTCTCCAGTGTCCAATTCACTTATTTCTTGGGCAGAAAACACTTGGGGCGTGAACAGAGAATCTTTTGGTGAGAACCTTACCATTCTTCAGAGCATAGCAAACAAATGCTCAGGGAAAGGGAAATGGAGTTTTGGAACTTCAACGAGATGGTCTAATCTTGCTAGCTCTGGTGGTCTCAAACGCTCATTCTTTGAAGAGACAAGATCAGCCTTGACAGACCTAAAAAATGAAAGAATCAAGATCAAATTAGTGTCAGGGCATGACATTGTGGCAGTGAAAGCCTTAGCTTGTGAACTAGGAATAGAAGTTCCCGCTGAAGATGGTTTTATTCTTCAAGGAAAAGAAATTCAAGATTTAAATGGCCCAGCCAGGTCAAAGAAGTTGGATGAAGCACTGGTAATGGGAGGTTTCCTTCCTGATCACAAGGTTCTCATGATTAGGTGTTTGCAAGATGAGGGTGACGTGGTTGCATTCTTTGGAGGATTGACATTAAATGACCCTGCAGTTCGAGAGGCAGCTGATATAGTGATCGATGCTAAGTCTCAGAACCTGAAATCTGATATGGAGAGTTCAAATGTATCTATTGAATGTTTCAGTGCAATAACTACAATTGTGAGGGCTGGGAGATGTCAATATCACAACATTCAAAAGTTCATTCAATTTCAGCTCACAACTAACTTATCTGGGTTATTCATAACCTTGATTACAACAATGTGCACCGGACAGTCTCCCCTAACGGCCATCCAGTTGATTTGGGTGAACTCGATAGTGTGCATTTTGGGAGGCCTAATGATGTTAATGAATTTAGACATCAGGGAAGATCAGCATGCTAACCAACCAAATAACCGGAAGCAGTCACTTATAACCCAAGAAATCTGGAAAGACATAGCCATTGATGTCTTGCTGCGGGCTTCTGTTTCTATGATATTTCTTTTTGGAGGACAAGTTACAGACAGCACAAAACAAGTTAGGAAGACTATGATCTTCAACATATTCATGTTATGTCAGGTCTTCAAGCAGCTCAACTTCTTGGGCCTAGCAATGAAGAAGGGAGTTTTCAAGATGGTTCCTCTGAGCTACTGTTTCTTGGTCGCATTAGGGGTTTGCCTGGTTATGCAGGTTCTGGTGATTCAATTTGCAAATAGCCTAGCAGATTGCATGAGCCTGAATGCAACTCAATGGGTTATCTGTTTCTTG 1446 0.4177 MDKVVSNQVADLHDLSSCATMGLVTVICVDASGGLMSKPMEVSRIRIGERDISNDMTSEINEVVLDKLKQGASVSVLAPEFILSPVSNSLISWAENTWGVNRESFGENLTILQSIANKCSGKGKWSFGTSTRWSNLASSGGLKRSFFEETRSALTDLKNERIKIKLVSGHDIVAVKALACELGIEVPAEDGFILQGKEIQDLNGPARSKKLDEALVMGGFLPDHKVLMIRCLQDEGDVVAFFGGLTLNDPAVREAADIVIDAKSQNLKSDMESSNVSIECFSAITTIVRAGRCQYHNIQKFIQFQLTTNLSGLFITLITTMCTGQSPLTAIQLIWVNSIVCILGGLMMLMNLDIREDQHANQPNNRKQSLITQEIWKDIAIDVLLRASVSMIFLFGGQVTDSTKQVRKTMIFNIFMLCQVFKQLNFLGLAMKKGVFKMVPLSYCFLVALGVCLVMQVLVIQFANSLADCMSLNATQWVICFL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2590g00001 482 Gene3D - 136 277 IPR023214 -
Pral2590g00001 482 PANTHER CATION TRANSPORTING ATPASE 12 115 - -
Pral2590g00001 482 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 482 IPR023298 -
Pral2590g00001 482 SUPERFAMILY HAD-like 146 344 IPR036412 -
Pral2590g00001 482 Gene3D - 278 482 - -
Pral2590g00001 482 Pfam Cation transporting ATPase, C-terminus 326 482 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2590g00001 Pral-Chr2590 1029 2687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2590g00001 141 480 Primary Pumps ATPases AT3G63380 34.971 2.09e-57 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2590g00001 K01537 - gmx:102661547 315.079