Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral258g00006 ATGTTTCTGCATAGAAACTCCATAGCTGAGTTGGTGATTCCTATTATTGCTGTTTTTGCATATTTTATTGTCGTACATGAGACTAATCAAAACGAGCAATCGTTTCTGGGTGAGTTATGGTCGTCTTTCTCTTTAAATCGTGGTCACCACCACCACCACCACCACCACCATCATTCCCACAAGAAACGACCTGATAATAGCAGCAGCGGTGAGATAACTGGCAACATATGTGATGATTTTCCACCGGGAATTCCGCCGCCGAATACCAATACGACGACGTATCTGTGTGTGGATCGACGAGGGTGCTGCAATTTCACCACCGTGCAAGCAGCTGTAAATGCTGTCCCAGATTTCAGCGATAAAAGAAACGTCATATGGATTAATAGTGGCCTTTATTATGAGAAAGTGATGGTGCCAAGAAGCAAACCAAACATCACATTTGAAGGACAAGGCTACACTTCAACGGCAATTGCATGGAACGACACAGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTCCAAGTCTTCGCCTCCAACTTCATTGCCAAAAACATAAGCTTCATGAACGTGGCGCCAATTCCAGGTCCTGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGAGTAGGGGGTGATCAGGCTCAGTTCTGGGGATGTGGGTTTTTTGGAGCACAAGATACTCTTCATGATGATAGGGGTCGCCATTACTTTGGGGATTGCTATATCCAGGGCTCCATTGATTTCATCTTCGGCAATGCAAGGTCTCTCTATGAGAATTGTCAACTAGTGTCAATTGCGAACCCGGTACCCCCGGGTCAAAAGTTCATAAACGGCGCCGTTACAGCTCAGGGGAGGTCATCAAACGACGAAAACACGGGCTTCGCTTTTGTGAACTGTAGCATAGGAGGCTATGGAAGGATATGGTTAGGGCGGGCATGGCGTCCTTACTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATCATTGCCCCTGAAGGTTGGAACGACTTCAATGACCCTTCCAGAGATCAGACAATATTCTATGGAGAATACAAGTGCACAGGGCCAGGGGCTGATCTGAATATGAGGGCGCCTTATGTACAGAGATTAAATGATACTATTGCTTCTACTTTCATTAACACATCATTTATTGATGGAGACCAATGGTTGTTTCCTCCCAAATAA 1191 0.4593 MFLHRNSIAELVIPIIAVFAYFIVVHETNQNEQSFLGELWSSFSLNRGHHHHHHHHHHSHKKRPDNSSSGEITGNICDDFPPGIPPPNTNTTTYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNVIWINSGLYYEKVMVPRSKPNITFEGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVEGAQAVAIRVGGDQAQFWGCGFFGAQDTLHDDRGRHYFGDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKFINGAVTAQGRSSNDENTGFAFVNCSIGGYGRIWLGRAWRPYSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYKCTGPGADLNMRAPYVQRLNDTIASTFINTSFIDGDQWLFPPK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral258g00006 396 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Pral258g00006 396 FunFam Pectinesterase 89 396 - -
Pral258g00006 396 Gene3D - 88 394 IPR012334 -
Pral258g00006 396 Pfam Pectinesterase 97 389 IPR000070 GO:0030599|GO:0042545
Pral258g00006 396 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 83 392 - -
Pral258g00006 396 SUPERFAMILY Pectin lyase-like 93 393 IPR011050 -
Pral258g00006 396 MobiDBLite consensus disorder prediction 51 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral258g00006 Pral-Chr258 56889 59647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral258g00006 44 392 Carbohydrate Esterase AT1G05310 71.920 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral258g00006 - - gmx:100806629 582.793