Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral258g00005 ATGGCTGCATCGACATCAGTTCTTGATTGTCAGGATGAAGAAAAAATGCTTACGAAGCCATCTGCAATACGTGATTACCCGCCTGGGATTGGTCGGACTACATCAACAGGCCGTGTCACTCCTAAAGTTACTGCTAGTTCGGGTGATTATTTGCAGAAGGCTGGGGCAAGAAGGTTTCCAGCAAGAAAAGTTTCAGCCATTAGAGACTACCCTGCTTTATGCGGACCTAATTTTCTGAGTCGGAGTAAGGGTGTTTGCGAGGACAAGCTCATGGACGGACATTTGGGCGGTGGTGCTGAAGAAATGAAGAGAAAATTTAATTGCCTTGCACAAGGTGATGGGTCTAAAGCTGTGATGACGCCTAGAAAGTCTCTGAATCATTCCGGGATGATGCTTGTGAAAAAGACAGAAGGAAATGCTTCTTCTGGAGGTATGGATGGAAAATGTTCTGATGTCTATAATGTAAATGTTCCACTTCTGCGTCGTGGTAATTTGAGCAGTGACCACAGTTACTCCCGAAATACTGTAAGGGAGATAATGCGCTGGTTCCAAGCAGTTTGTAGAAAATTGTTGCAAGAAGAAGAAGCAAAGTTCAAAGGCCAAGGAAAGATTCGTAGGAGGATCGATTTAGAGGCAGCTAAGATTCTTAAAAAGGAAGGCAAATATGTTAATGCTGGCAGGCTGATCTTTGGTTCTGTCCCTGGGGTTGAAATAGGTGATGAGTTCGACTACAGAGTGGAGCTTAATCTCGTCAGTCTTCATCGCAATTTACAGGCTGGCATAGACTATGGAATGCACAATGGTGTGCTCCTTGCTGCTAGTATTGTTGCATCTGGGGGGTACGACGATGAGTTGGATAATTCAGGTGTCTTGATTTATTCGGGGCATGGGGGGAATGTGATGCACAGCAAGAAAAAGCCTGAAGACCAGAAGCTTGAGCGGGGGAATCTTGCTTTGAAGAACAGTAGCAAGGAAAAAAATCCTGTCAGGGTGACCCGTGGTGCTTTCTTTGGAGATGAAAGTCGTAAGAGATATGTGTATGATGGGTTGTATGAAGTTGAGACATATTGGCAAGAAAGGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTGCAAAGAATCCCAAACCAACCAGAGCTTCCTTGGATTGAACTGAAGAATTCCAAAAAGTTCACATTAAGGAAGGGTTTATGTGTCATTGACATCTCACATGGTAAGGAGGGACTGCCAATTCGTGCTGTAAATACCATAGATGATGAAAGACCACCACCATTTGAATATATCACTAGGATGATCTATCCTGATTGGTTGCATCCGACGCCTGCTAAGGGATGTAACTGTACGGACAGATGCTCTGACCCGACAAGATGTTCTTGTGCTGTTAAAAATGGAGGAATCCCATTCAATCACACAGGGTGTATTGTAGAAGTAAAGCCTCTGGTGTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAACAGAGTCAGCCAACGTGGAATAAAATTCCCGCTTGAAGTTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACGCTCCATTCCTTCTGGCAGTTTTGTATGCGAATACATAGGAGAGTTGCTTGAAGACAAGGAAGCTGAACAAAGAACTGGTCATGATGAGTATCTCTTTGATATAGGTAATAATTTGATCAGTAATGGTATACTTTCTGATGGAGTCTTCATGCCTGAAGTCTCTAGGGATGGTGGTGGTTTTACCATTGATGCAGCTAGGTATGGTAATTTGGGCAGATTTTTCAACCACAGTTGCGCCCCTAACATGTATGCACAAAATGTTCTGTATGATCATGGTGACCGCAAGATTCCTCACATAATGCTGTTTGCTGCTGAGAACATTTCTCCGTTAAAAGAGCTGACTTATGATTACAATTACTCTAAAGATCAAATCTTCGATTCTGATGGCAATATAAAGAAGAAGGATTGCTATTGTGGCTCTTTGGGGTGTACTGGAAGGATGTATTGA 2019 0.4339 MAASTSVLDCQDEEKMLTKPSAIRDYPPGIGRTTSTGRVTPKVTASSGDYLQKAGARRFPARKVSAIRDYPALCGPNFLSRSKGVCEDKLMDGHLGGGAEEMKRKFNCLAQGDGSKAVMTPRKSLNHSGMMLVKKTEGNASSGGMDGKCSDVYNVNVPLLRRGNLSSDHSYSRNTVREIMRWFQAVCRKLLQEEEAKFKGQGKIRRRIDLEAAKILKKEGKYVNAGRLIFGSVPGVEIGDEFDYRVELNLVSLHRNLQAGIDYGMHNGVLLAASIVASGGYDDELDNSGVLIYSGHGGNVMHSKKKPEDQKLERGNLALKNSSKEKNPVRVTRGAFFGDESRKRYVYDGLYEVETYWQERGPHGKMVFKFQLQRIPNQPELPWIELKNSKKFTLRKGLCVIDISHGKEGLPIRAVNTIDDERPPPFEYITRMIYPDWLHPTPAKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQRGIKFPLEVYKTDKRGWGVRSLRSIPSGSFVCEYIGELLEDKEAEQRTGHDEYLFDIGNNLISNGILSDGVFMPEVSRDGGGFTIDAARYGNLGRFFNHSCAPNMYAQNVLYDHGDRKIPHIMLFAAENISPLKELTYDYNYSKDQIFDSDGNIKKKDCYCGSLGCTGRMY 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral258g00005 672 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 164 664 - -
Pral258g00005 672 Pfam SAD/SRA domain 230 378 IPR003105 -
Pral258g00005 672 ProSiteProfiles YDG domain profile. 231 374 IPR003105 -
Pral258g00005 672 SMART G9a_1 226 378 IPR003105 -
Pral258g00005 672 MobiDBLite consensus disorder prediction 18 45 - -
Pral258g00005 672 SUPERFAMILY PUA domain-like 213 387 IPR015947 -
Pral258g00005 672 SMART preset_2 400 490 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral258g00005 672 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 672 IPR025794 GO:0016571
Pral258g00005 672 Pfam SET domain 517 642 IPR001214 GO:0005515
Pral258g00005 672 ProSiteProfiles Post-SET domain profile. 656 672 IPR003616 -
Pral258g00005 672 SMART set_7 506 648 IPR001214 GO:0005515
Pral258g00005 672 Gene3D - 213 395 IPR036987 -
Pral258g00005 672 ProSiteProfiles Pre-SET domain profile. 444 503 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral258g00005 672 Pfam Pre-SET motif 403 498 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral258g00005 672 ProSiteProfiles SET domain profile. 506 642 IPR001214 GO:0005515
Pral258g00005 672 SUPERFAMILY SET domain 389 649 IPR046341 -
Pral258g00005 672 Gene3D SET domain 396 672 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral258g00005 Pral-Chr258 52106 54124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral258g00005 227 672 EF-hand Containing Proteins AT5G13960 39.917 3.63e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral258g00005 SAD_SRA 1.2e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral258g00005 K11420 - qsa:O6P43_024410 746.117