Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral258g00004 ATGGTTAGGAAGCCATTTGCAATTCGTGATTACCCACCTGGGATAGGACGGAATACAGCAAGAATCCATGTTACTCCTAGAGAAGGTACTGCAAAGGTTGTACTTTTTGAGAAGGATGGTGAAGTTAATCCTCGATACTCTAAGTTCTTGAGTTCAACTCCTATTGAGACAACTGAGAAAATGTCGATGGGTCCTGAATTGTCTCCATATGTGAAAACGGCCAGTTCGAGTGATTATTCACAGAACGCTGCAACTAGAAGATTTATTTCAGCCATTAGAGACTATCCTCCATTTTGTGGACCTAATTCTCTGAGTCTGAGTAAGGGCGATGTTTCCAAGGGCAAGCTCATGGACAGGCATTTGAGTGGTGCTACAGAAGAAAAGAAGAGAAAACTTGATTGCCTCACAGGGGGTGATGGGTCTAAAGCTGTGTTGAGGACTAAAGACTCTCTGAATCATTCCAAGATAAAGGTTTTGAAAAAGAAAGAAGGACATGCTGCTCCTGGTGGTATGGCTACACTTGCGGTTTTAGGAAAAAATTGTCTTGATAACAATTATGGTAGAAAATTTTCTGATGGCCATAGATCATATGGTGTAAATGTTCCACTTCTGCATCGTCGTAATTTGAGTATTCGCAACAATGACGCAACTGTGACACGAAATACTGTAAGAGAGACACTGCGCTTGTTTCAAGCTCTTTGTAGGAAATTGTTGCAAAAACTAGAAGCAGAGTCAAAAGGCCAAGCAAAAGTTCGTAAGAGGGTTGATTCAGATGCAGCAAAGATCCTCAGATATGAAGGAAAATATGTGAATGCAGGCAAGCAGATCTTTGGTCCTGTCCCTGGGGTTGAAGTAGGTGACGAATTTGATTATAGGGTGGAGCTTAATATTGTTGGTCTCCATCGCCAAACACAAGCTGGCATAGATTTTGCGAAGATCAACGGTGAGCACCTTGCAACTAGTATTGTTGCATCTGGGGGATACCATGACGAGTTGGATAACTCAGGTGTTTTGATTTATTCAGGGCAAGGAGGGAATGTGATGTGCAGTAAGAAACAACCTGAAGACCAGAAGCTTGAGAGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAACCCTGTTAGAGTGATACGTGGTGCTTTCTTTGAAGACGGAAATCATAGGAGATTTGTGTATGATGGATTGTATGAAGTCGAGGCATATTGGCAAGAAATGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTGCGAAGAATCCCAAATCAACCAGAGCTTCCTTGGATTGAACTGAAGAAATCCAACATGTTCACATTAAAGAAAGGCCAGTGTGCTGTTGACATCTCACATGGTAAAGAGGAATTACCAATTCGTGCTGTGAATACCATAGATAATGAAAAACCTCCATCATTTGAATATATTACTCGGATGATCTATCCTAATTGGTTGCATCTGACACCTGCTAAGGGATGTAACTGTACAGACAGATGCTCTGACCCGACAAGATGTTCTTGTGCTGTTAAAAATGGAGGAATCCCATTCAATCACACAGGTTGTATTGTAGAAGTAAAGCCTCTGGTGTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAACAGAGTCAGCCAACGTGGAATAAAATTGCCACTTGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACGCTCCATTCCTTCTGGCAGTTTTGTATGCGAATACATAGGAGAGTTGCTTGAAGACAAGGTAGCTGAACAAAGAACTGGTCATGATGAGTATCTTTTTGATATAGTCTCTGAGGATGGCAGCGGCTTCACCATTGATGCAGCTCGGTGTGGTAATCTGGGCAGATTTTTCAACCATAGTTGCGCCCCCAATATGTATGCACAAAATGTTCTTTTTGATCATGGCGACTGCAGGATTCCCCACATAATGCTGTTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGATCTAATCCTCGATTCGGATGGCAACATAAAGAAGAAGGATTGCTTTTGTGGCTCCGTGGGTTGTACTGGAAGGATGTATTGA 2106 0.4202 MVRKPFAIRDYPPGIGRNTARIHVTPREGTAKVVLFEKDGEVNPRYSKFLSSTPIETTEKMSMGPELSPYVKTASSSDYSQNAATRRFISAIRDYPPFCGPNSLSLSKGDVSKGKLMDRHLSGATEEKKRKLDCLTGGDGSKAVLRTKDSLNHSKIKVLKKKEGHAAPGGMATLAVLGKNCLDNNYGRKFSDGHRSYGVNVPLLHRRNLSIRNNDATVTRNTVRETLRLFQALCRKLLQKLEAESKGQAKVRKRVDSDAAKILRYEGKYVNAGKQIFGPVPGVEVGDEFDYRVELNIVGLHRQTQAGIDFAKINGEHLATSIVASGGYHDELDNSGVLIYSGQGGNVMCSKKQPEDQKLERGNLALKNSSKKKNPVRVIRGAFFEDGNHRRFVYDGLYEVEAYWQEMGPHGKMVFKFQLRRIPNQPELPWIELKKSNMFTLKKGQCAVDISHGKEELPIRAVNTIDNEKPPSFEYITRMIYPNWLHLTPAKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQRGIKLPLEIYKTDKRGWGVRSLRSIPSGSFVCEYIGELLEDKVAEQRTGHDEYLFDIVSEDGSGFTIDAARCGNLGRFFNHSCAPNMYAQNVLFDHGDCRIPHIMLFAAENIPPLKELTYDYNYSKDLILDSDGNIKKKDCFCGSVGCTGRMY 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral258g00004 701 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 142 701 IPR025794 GO:0016571
Pral258g00004 701 SMART preset_2 447 537 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral258g00004 701 SUPERFAMILY PUA domain-like 264 434 IPR015947 -
Pral258g00004 701 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 163 693 - -
Pral258g00004 701 Pfam SET domain 564 671 IPR001214 GO:0005515
Pral258g00004 701 ProSiteProfiles YDG domain profile. 278 421 IPR003105 -
Pral258g00004 701 ProSiteProfiles SET domain profile. 553 671 IPR001214 GO:0005515
Pral258g00004 701 Pfam SAD/SRA domain 277 425 IPR003105 -
Pral258g00004 701 ProSiteProfiles Pre-SET domain profile. 491 550 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral258g00004 701 SMART set_7 553 677 IPR001214 GO:0005515
Pral258g00004 701 ProSiteProfiles Post-SET domain profile. 685 701 IPR003616 -
Pral258g00004 701 SMART PostSET_3 685 701 IPR003616 -
Pral258g00004 701 Gene3D SET domain 443 701 IPR046341 -
Pral258g00004 701 Gene3D - 252 442 IPR036987 -
Pral258g00004 701 SMART G9a_1 273 425 IPR003105 -
Pral258g00004 701 Pfam Pre-SET motif 450 545 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral258g00004 701 SUPERFAMILY SET domain 436 672 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral258g00004 Pral-Chr258 44157 46316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral258g00004 220 698 Su(var)3-9 homologs AT5G04940 38.610 4.97e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral258g00004 SAD_SRA 3.2e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral258g00004 K11420 - jre:108991569 705.286