Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2587g00005 ATGGGAATGTCAAAGAGCTTCTCTTTTCTCGTAGGTTGTCTGGTTTTTGTAGTTCTGGTTCAGTCTCAGGATCAATCAGGATTCATAAGCATAGACTGTGGGGCACCTGCCAAGTCCAACTACACTGAGAAGACAACAGGCATACATTACATATCAGATGAGGAGTTCATAGACTCTGGAGTGAGTAAATCGATAACCAATGATATCCAAAGTACATATCAACGGCAAGTTTGGAACCTGAGAAGTTTTCCTCAAGGACCAAGAAACTGTTACAGAATAAACATCAAAAGTGGATCTAAATATCTGATCAGGGCTACTTTTGTGTACGGGAATTATGATGGCGGGAATGATTTACCGAGTTTTGATCTTCATCTTGGGCCTAACTTGTGGAAGACAGTGAAAATAACCAATTCATCATCTGAAGTAGTCCCTGAGATCATACATGTTCCATCATTAGATTACATTCAACTCTGTCTGGTTGACACAGGCTCTGGAACCCCATTTATCTCTGCTATAGAATTGAGGACTTTGGTGGGCAGTATTTATGATATCCACTCAGGAATCTTGTCACTTGCCCAGAGGTTGGATTTAGGCTCAACCAGCAACAAAACATACAGGTATAGTTATGATGCTTATGATCGAGGCTGGGGATATTTCTATCACCAAAACTGGACACAAATTAATGCTTCAATTTCTGAAAATTCCTTATTTCAAAATTATTACAATCCACCAACCATTGTTATGAGTAATGCTGCGACACCAGTAAATGAAAATGAAAGTGCTCCAATGCAAGCACACTGGGAGCTAGAAGACGCAACAGACCAAGCGTATGTATACATGCATTTTTTAGAGCTTCAAGTTTTAGAAAAGAATCAGACAAGATCATTCAATATTACCATCAATGGTAATTTTCTTGCAAATGTTGTCCTTCCGTACCAAGTCATATCCACTGTATTCAACATCACGAGTGGAGAAAAAATTGAAATTTTGCTTCAGAAGACCGAGAATTCAACCCTTCCACCTATCCTCAATGCTCTTGAAATTTATACATTTAAAGAATTTTCGCAATCAGAAACAGAGCAAGAAGATGTTGATGCAATCACAACAATCAAGTCTTCTTATGGGGTAGCAAGAAATTGGCAAGGTGATCCATGTAGTCCTAAGGCCTACGTTTGGGAAGGTCTAAATTGTACTTATAATGGCAAGAATTCTCCTAGAATCGCAGCCCTGGATTTGTCTTCAAGTGGATTGAAAGGAAACATACATCCTTCCATCTCAAAGCTCACCATGCTGGAGAAGTTGGATTTATCAAACAACAGCTTAAATGGAGCAGTGCCTAATTCTCTGGCTCAACTACAGAACCTCAAGATCTTAAACCTGGAGAACAACAACTTGACAGGTAGAGTTCCCTCTAATCTGCTTGAGAAATCAAAGAAAGGTACCCTGTCGCTAAGTGTTGGACAGAATCCATATCTATGTGAATCTCCTTCGTGCAACAACAACGAAAAGAACAATGTTACTATTCCCATAGTAGTATCAATTGTTGGAGCTCTAATCCTTCTGGCAGTTGTGGCAATCATATTTTTTACCCTTAAAAGAAGACAACAAAGAGGAACAGCTCCAATTGAGACCTCACAGAAAGTTGAAAAGGTTGAAGAACAAAAAGGCACATCTCTGGAGGCCATAAGCAGACAATACTCATATTCTGATGTCCACAAAATAACCAATAACTTCGGTATAATTCTCGGAAAAGGCGGCTTTGGAGCAGTTTATTTGGGTTACGTTGAGGAAACTCCTGTAGCAGTTAAAATGCTCTCTTCATCATCCGTTCAAGGTTATCAACAATTCCAAGCCGAGGTTAAACTTTTAATGAGAGTTCATCACAGAAATCTTACTTCCCTTGTTGGGTATTGCAATGAAAAAACCCATAAAGGGCTCATATATGAGTATATGGCTAATGGTAACTTACAAGATTACCTTTCAGGAAAAAGCAGCAACTCAAAGTTCTTGACTTGGGAAGACAGACTTTGTATAGCATTGGATGCGGCACTAGGGTTGGAGTATTTGCATAATGGATGTAAGCCACCTATAATCCATAGAGATGTAAAATCTTCAAACATCTTGCTGAATGAAAAATTCAAAGCAAAAATAGCTGACTTTGGCCTATCTAAAACCATCTTAACTGATGATGGAACTCATGTATCAACTGTTGTAGCAGGAACTCCTGGTTATTTAGATCCTGAGTACTATATAACAAGCAGATTGACAGAGAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTTTCGAGATAATCACAAGTCAGGCAGCCATATCTAGAAACCATGAGAGAACTCACATAAGTCAATGGGTTAGCTCCATGGTTGCTAAAGGAGATATAAAGGCCGTTGTTGACTCAAGACTAAGTGGAGACTTTGATAGTAACTCCGCTTGGAGAGTTGTGGAAATGGCAATGACTTGTGTGTCTCCAAAACCCAACAACAGGCCAACCATGAGTGAGGTAGTTAATGAACTAAAGGAGTGTTTGGCAACAGAAGTAGCCAGAACCAACCACAGTAGTGGTGCAGATATGGGAGACTCAGATGAATTAGGGTCCTTGAATATGACAATAGAATCCTCTCCCTTGGTCAGGTAG 2655 0.3947 MGMSKSFSFLVGCLVFVVLVQSQDQSGFISIDCGAPAKSNYTEKTTGIHYISDEEFIDSGVSKSITNDIQSTYQRQVWNLRSFPQGPRNCYRINIKSGSKYLIRATFVYGNYDGGNDLPSFDLHLGPNLWKTVKITNSSSEVVPEIIHVPSLDYIQLCLVDTGSGTPFISAIELRTLVGSIYDIHSGILSLAQRLDLGSTSNKTYRYSYDAYDRGWGYFYHQNWTQINASISENSLFQNYYNPPTIVMSNAATPVNENESAPMQAHWELEDATDQAYVYMHFLELQVLEKNQTRSFNITINGNFLANVVLPYQVISTVFNITSGEKIEILLQKTENSTLPPILNALEIYTFKEFSQSETEQEDVDAITTIKSSYGVARNWQGDPCSPKAYVWEGLNCTYNGKNSPRIAALDLSSSGLKGNIHPSISKLTMLEKLDLSNNSLNGAVPNSLAQLQNLKILNLENNNLTGRVPSNLLEKSKKGTLSLSVGQNPYLCESPSCNNNEKNNVTIPIVVSIVGALILLAVVAIIFFTLKRRQQRGTAPIETSQKVEKVEEQKGTSLEAISRQYSYSDVHKITNNFGIILGKGGFGAVYLGYVEETPVAVKMLSSSSVQGYQQFQAEVKLLMRVHHRNLTSLVGYCNEKTHKGLIYEYMANGNLQDYLSGKSSNSKFLTWEDRLCIALDAALGLEYLHNGCKPPIIHRDVKSSNILLNEKFKAKIADFGLSKTILTDDGTHVSTVVAGTPGYLDPEYYITSRLTEKSDVYSFGVVLFEIITSQAAISRNHERTHISQWVSSMVAKGDIKAVVDSRLSGDFDSNSAWRVVEMAMTCVSPKPNNRPTMSEVVNELKECLATEVARTNHSSGADMGDSDELGSLNMTIESSPLVR 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2587g00005 884 FunFam Leucine-rich repeat receptor-like kinase 362 495 - -
Pral2587g00005 884 Pfam Protein tyrosine and serine/threonine kinase 580 845 IPR001245 GO:0004672|GO:0006468
Pral2587g00005 884 PANTHER OS07G0107800 PROTEIN-RELATED 29 849 - -
Pral2587g00005 884 SMART serkin_6 576 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2587g00005 884 Pfam Leucine rich repeat 406 465 IPR001611 GO:0005515
Pral2587g00005 884 CDD STKc_IRAK 582 847 - -
Pral2587g00005 884 SUPERFAMILY Protein kinase-like (PK-like) 560 845 IPR011009 -
Pral2587g00005 884 PRINTS Leucine-rich repeat signature 431 444 - -
Pral2587g00005 884 PRINTS Leucine-rich repeat signature 452 465 - -
Pral2587g00005 884 Gene3D Phosphorylase Kinase; domain 1 558 650 - -
Pral2587g00005 884 MobiDBLite consensus disorder prediction 856 884 - -
Pral2587g00005 884 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 651 858 - -
Pral2587g00005 884 SUPERFAMILY L domain-like 367 475 - -
Pral2587g00005 884 Pfam Malectin-like domain 31 350 IPR024788 -
Pral2587g00005 884 CDD TM_EGFR-like 507 537 - -
Pral2587g00005 884 Gene3D Ribonuclease Inhibitor 364 485 IPR032675 -
Pral2587g00005 884 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524
Pral2587g00005 884 Gene3D Transferase(Phosphotransferase) domain 1 651 866 - -
Pral2587g00005 884 ProSiteProfiles Protein kinase domain profile. 576 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2587g00005 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Pral2587g00005 884 FunFam Leucine-rich repeat receptor-like protein kinase 547 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2587g00005 Pral-Chr2587 68256 72675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2587g00005 1 884 Receptor kinase-like Gene Family AT1G51800 48.950 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2587g00005 Malectin_like 7.8e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2587g00005 - - qsa:O6P43_027684 1078.16