LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2587g00004	ATGGGATTGTCAAAGAGCTTCATCTCTTTCCTCCTGCTGGTTTTTGCAGTTCTGGTTCAATCTCAGGCTCAATCAGGATTCATAAGCATAGATTGTGGGGCACCTGCAAAGTCCACCTACTTTGAGGAGACAACAGGCATATATTATATATCAGATGAGAAGTTCATAGAATCTGGAGTGAGTAACGCCATAACCACTGAGCTCCAAAGTAGGCTTCAACGGCAAGCTTGGAACCTAAGGAGCTTTCCTCAGGGAACAAGAAACTGTTACAGAATAAGCATCACAAGTGGCTCTAAATATCTGATCAGGGCCTTTTTTCTGTATGGAAATTATGATGGCCAGAATGTGTTGCCAACTTTTGATCTTCATCTTGGGCCTAACTTTTGGGAAACAGTAAAAATAACCAATGCATCTGTGCCGTTACTGCCTGAGATCATACATGTTGCATCACAAGATTACATTCAAATCTGTCTGGTTGACACGGGCTCTGGAACGCCATTCATCTCTGCTATAGAATTAAGGGCCTTGGTTATGGTGAATGGTGTTTATAATACTCAGTTTGGATCCTTGTCACTTCATTTGAGGTTAGATTTAGGCTCAACCAGCAACAAAACATACAGGTATAGATATGATGCTTATGATCGCATTTGGCTATATGTCTACCACCAAGATTGGACGCAAATAAATGCTTCAATTTCTGAAGAATCCTTAACTCAAAATGTTTTCAAACCACCAGCCATTGTTATGAGAAATGCAGCCACGCCAATAAATGGAAGTGCTCCAATGAAAATAGAATGGGAGCCAGAAGACGCAACAGACCAATTCTTTGTTTACATGCATTTTTCAGAGCTTCAAGTATTAGAAAAGAATCAGACAAGATCAATCACTGTTACCATCAATGGCGAACCCTATTTTATCGTCGAACCTAATTACCGACTCACAAACACTATGACACACCCCGAATCTATCAGTGGAGAAAAAATTCAGATTTGGCTTCAGAAGACTGAGAATTCAAACCTCCCTCCCATTCTCAACGCTATTGAAATTTATAGGGTTAGAGAATTTTCCCAGTCAGAAACAGATCAAAGAGATGTTGATGCGATCGCAACAATCAAGTCTTCTTATGGGGTGACAAGAAACTGGCAAGGAGATCCATGTAGTCCAGTGGCCTATATATGGGAAGGTCTAAATTGTACTTCTAATCGCCAGAATTCCTCTAGAATCACAGCACTGAATTTGTCTTCAAGTGGATTGACAGGACAGATAGATCCTTCCATCGCAAATCTCACCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAGTGGAGTAGTGCCTAATTTTCTGTCTCAACTGCAGAACCTAAAGAGCTTAAACTTGAAGAGCAACAATTTCACAGGTACAGTTCCCTCTGATCTGCTTGAAAAATCAAAGGAAGGTACGCTGTTGCTAAGTGTTGGACAAAATCCAAATCTATGTGAATCTCCTTCGTGCAACAAAAAAGAGAACAATGTTACCATTCCCATAGTGGCATCAGGTGCTGGGGTTCTGATCCTTCTGATAGCTGTGACGATCACATTTGTTATTCTTAAAAGGAGAAAACCTAGAGGTGAGGCTGCTATATGCGCACTTGAGACCTCAGAGCGAGTTGACAAAGTTGATGAACAAAAGGACACACCTCTGCAAATCATCAATAGGCAATATTCATATTCTGATGTCCTCAAAATGAGCAATAACTTTAGCACGGTTCTTGGAAAAGGTGGGTTTGGAACAGTTTATTTGGGTTACATTGATGAAACTCCAGTGGCAGTTAAAATGCTCTCCTCGTCATCGGTACAAGGTTATCAACAATTCCAAGCCGAGGTTAAACTCTTATTGAGAGTTCATCACAGAAATCTGACTTCCCTTATTGGGTATTGCAATGAGGAAACTAGTAAGGGGCTCATATATGAGTACATGGCTAATGGTAACTTACAAGAGTACCTTTCAGGAAGAAGAAACGATTCAAAGTTCTCGACTTGGGAAGACAGACTTTATATAGCACTAGATGCAGCACTAGGGTTGGAGTATCTGCATTATGGATGTAAGCCACCTATAATCCACAGAGACGTAAAATCTTCAAACATCTTGCTGAATGAAAAATTCAAAGCAAAAATAGCCGACTTTGGTCTATCTAAAATCATCCCAACTGATGATGGAACTCATGTGTCAACTGTTGTTGCGGGTACTCCTGGTTATCTAGACCCCGAGTACTTTATAACGAACAAATTGATAGACAAAAGTGATGTTCATAGCTTTGGAGTAGTTCTTTTCGAGATAATCACAAGTCTACCAACCATATCAAGAAACCATGAGAAAACTCACATAAGTGATTGGGTTAGCTCCATGGTTGCTAAAGGGGATATAAATGCCATTGTTGACTCAAGGTTAAGTGGAGAATTTGATAGCAACTCTGCTTGGAGAGCTGTGGAAATTGCAATGACTTGTGTATCTCCAAACCCAAACAACAGGCCAACCATGAGTGGGGTAGTGAAAGAGCTAAAAGGGTGTTTGGCAACAGAATTAGCCAGAATCCAACGTAATGGTGCTAATGCAAGAGAGCCAGCTGAATTAGTGTCCATGAATATGATGAGTTCTACAGAATTCTCTCTCTCAGGTCGGTAG	2667	0.4049	MGLSKSFISFLLLVFAVLVQSQAQSGFISIDCGAPAKSTYFEETTGIYYISDEKFIESGVSNAITTELQSRLQRQAWNLRSFPQGTRNCYRISITSGSKYLIRAFFLYGNYDGQNVLPTFDLHLGPNFWETVKITNASVPLLPEIIHVASQDYIQICLVDTGSGTPFISAIELRALVMVNGVYNTQFGSLSLHLRLDLGSTSNKTYRYRYDAYDRIWLYVYHQDWTQINASISEESLTQNVFKPPAIVMRNAATPINGSAPMKIEWEPEDATDQFFVYMHFSELQVLEKNQTRSITVTINGEPYFIVEPNYRLTNTMTHPESISGEKIQIWLQKTENSNLPPILNAIEIYRVREFSQSETDQRDVDAIATIKSSYGVTRNWQGDPCSPVAYIWEGLNCTSNRQNSSRITALNLSSSGLTGQIDPSIANLTMLEKLDLSNNSLSGVVPNFLSQLQNLKSLNLKSNNFTGTVPSDLLEKSKEGTLLLSVGQNPNLCESPSCNKKENNVTIPIVASGAGVLILLIAVTITFVILKRRKPRGEAAICALETSERVDKVDEQKDTPLQIINRQYSYSDVLKMSNNFSTVLGKGGFGTVYLGYIDETPVAVKMLSSSSVQGYQQFQAEVKLLLRVHHRNLTSLIGYCNEETSKGLIYEYMANGNLQEYLSGRRNDSKFSTWEDRLYIALDAALGLEYLHYGCKPPIIHRDVKSSNILLNEKFKAKIADFGLSKIIPTDDGTHVSTVVAGTPGYLDPEYFITNKLIDKSDVHSFGVVLFEIITSLPTISRNHEKTHISDWVSSMVAKGDINAIVDSRLSGEFDSNSAWRAVEIAMTCVSPNPNNRPTMSGVVKELKGCLATELARIQRNGANAREPAELVSMNMMSSTEFSLSGR	888

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2587g00004	888	SUPERFAMILY	Protein kinase-like (PK-like)	559	848	IPR011009	-
	Pral2587g00004	888	Pfam	Leucine rich repeat	407	466	IPR001611	GO:0005515
	Pral2587g00004	888	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	700	712	IPR008271	GO:0004672\|GO:0006468
	Pral2587g00004	888	Pfam	Protein tyrosine and serine/threonine kinase	581	848	IPR001245	GO:0004672\|GO:0006468
	Pral2587g00004	888	Gene3D	Transferase(Phosphotransferase) domain 1	654	869	-	-
	Pral2587g00004	888	FunFam	Leucine-rich repeat receptor-like kinase	363	496	-	-
	Pral2587g00004	888	ProSiteProfiles	Protein kinase domain profile.	579	852	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2587g00004	888	CDD	STKc_IRAK	585	850	-	-
	Pral2587g00004	888	Pfam	Malectin-like domain	30	352	IPR024788	-
	Pral2587g00004	888	SMART	serkin_6	579	852	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2587g00004	888	SMART	LRR_typ_2	429	452	IPR003591	-
	Pral2587g00004	888	SMART	LRR_typ_2	453	477	IPR003591	-
	Pral2587g00004	888	Gene3D	Ribonuclease Inhibitor	365	483	IPR032675	-
	Pral2587g00004	888	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	654	860	-	-
	Pral2587g00004	888	PANTHER	OS07G0107800 PROTEIN-RELATED	28	852	-	-
	Pral2587g00004	888	FunFam	Leucine-rich repeat receptor-like protein kinase	551	653	-	-
	Pral2587g00004	888	SUPERFAMILY	L domain-like	375	474	-	-
	Pral2587g00004	888	ProSitePatterns	Protein kinases ATP-binding region signature.	585	606	IPR017441	GO:0005524
	Pral2587g00004	888	Gene3D	Phosphorylase Kinase; domain 1	562	653	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2587g00004	Pral-Chr2587	58960	64271	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2587g00004	1	858	Receptor kinase-like Gene Family	AT1G51800	48.912	0.0	828

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Pral2587g00004		Malectin_like	5.4e-107	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2587g00004	-		-	gmx:100785345	1081.24