Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2587g00003 ATGAAAATGTCAAAGTGTTTCTTCTCTTCTCTCGTAGGTTGTCTGCTTTTTGCAGTTCTGGCTCAATCTCAGGATCAGTCAGGATTCATAAGCATAGATTGTGGGATACCTGCAAAATCCACCTATATAGAGAAGACAACAGGCATAAATTACATATCAGATGAGAAGTTCATAAATTCTGGTGTGAGTAACTCCATAACCAGTGAGCTCCAAAGTATGTATCAACAGCAACTTTGGAACCTGAGAAGCTTTCCTCAAGGAACAAGAAACTGCTACAGAATAAACATCACAAGTGGCTCTAAATATCTGATCAGGGCTAATTTTCTGTACGGGAATTATGATGGCCAAAATGAATTACCAAGTTTTGATCTTCATCTTGGGCCTAACTTGTGGGAAACAGTGGAAATAACCAATGCATCTCTGTTACTAAGCCCTGAGATCATACATGTTCCATCACTCGATTACACACAAATCTGTCTGGTTGACACGGGCTCTGGAACCCCATTTATCTCTGCTATAGAATTAAGGAATTTGATGAACGATACTTATGTTACTCAGTCTGGATCCTTGTCACTTTACTTGAGGTTGGATTTAGGCTCAACCAGCAAAAGAACATACGGTTATGATATTTATGATCGCCTCTGGTCATATAATGTCTACAACCCGGACTGGACGCAAATAAGTGCTCCAATTTCCGCAGATTCCTTGGTTCAAAATCATTACAATCCACCAGCCATTGTTATGAGTAATGCAGCCACACCGGTAAATGAAAGCGCTCCAATGTTAGTGTGGTGGGAGCCCAAAAATGCAACAGACCAATTCTATGTTTACATGCATTTTGCAGAGCTTCAAGTCTTGGAAAAGAATCAGACAAGATCATTCACCATTACCCTCAATGGCGATCTCTTCTATGCTGATCTTGTGCCTCAGTACCAAGCCACAACCACTATGTTCAGCAAGTATGCTACCAGCGGAGAAAAAAATCAGTTTTTGCTTAAGAAGACTAAGCATTCAACCCTCCCTCCCATTCTCAACGCCATTGAAATTTATACAGTGAAAGAATTTTTGCAATCAGAAACAGAACAAGAAGATGTTGATGCAATTACAACAATCAAGTCTTCTTATGGGCTGACAAGAAATTGGCAAGGAGATCCATGTAGCCCTGTGGCCTACATTTGGGAAGGTCTAAATTGTACTTATAATGGCCAGAATTCCCCAAGAATTACAGCCCTGAATTTATCTTCAAGTGGGTTGACAGGACAGATAGATCCTTCCATCTCAAATCTCACCATGTTGGAGAAGTTGGATTTATCAAATAATAGCTTAAGTGGACCAGTTCCAGATTTTCTGTCTCGGCTACAAAACTTGAAGATCTTAAACATTCAGAACAACAACTTCACAGGCACGGTTCCCACTGATCTGGTTGAAAAATCAAACAAGGGTTCCCTGTCACTAAGTGTTGGAGAAAATCCACATCTATGTGAATCTCCTCCATGCGACAAGAAGAAAAAGAACAATATTATTATTCCCGTAGTTGTATCAGTTGCTGGAGTTCTGCTCCTTGTGGTAGTCACAGCAACTATATTTTTTACCCTTAAAAGGAGAAAGCCAAGAGGAACAAGTCCAATTGAGACCTCACAGCAAGTTGAAAAAGTTGAAGAACAAAATGATACCACTCTGCAAGTCACAAATAGACAATATTCATACCATGATGTCCTCAAAATGACCAACAACTTCAGCACAATTCTCGGAAAAGGTGGGTTTGGAACAGTTTATTTGGGCCACATTGCTGAAACTCCTGTTGCAGTTAAAATGCTCTCTCTATCTTCAGTTCAAGGTTATCAGCAATTCCAAGCAGAGGTTAAACTTTTAATGAGAGTTCATCACAGAAATCTGACTTCCCTTGTTGGGTATTGCAACGAAGAAACCAATAAGGGGCTCATATATGAGTACATGGCTAATGGTAACCTACAAGAGTACCTTTCAGGAAAAGACAACAAATCAAGGTTCCTGACTTGGCGAGACAGACTCTGTATGGCACTGGATGCAGCATTAGGATTGGAGTATTTGCATAATGGATGTAAGCCACCTATAATTCATCGAGATGTAAAATCGTCAAACATCTTGCTGAATGAAAACTCCAGAGCAAAAATAGCGGACTTTGGTCTATCTAAAATTATCCCAACTGATGGTGGAACTCATGTGTCAACCGTTGTTGCTGGTACTCCTGGTTATCTAGACCCTGAGTACTATATAACAAACAGATTGACAGAGAAAAGTGATGTTTATAGTTTTGGAGTAGTTCTTTTTGAGATAGTCACAGGTCTACCAGTAATATCTGGAAACCATGAGAGAACTCACATAAGTCAATGGGTTAGCTCCATGGTTGCTAAAGGGGACATAAAGGCTATTGTTGACTCAAGGTTAAGAGGGGAGTTTGATAGTAACTCTGCTTGGAGAGCTGTGGAAATGGCCATGACTTGTGTGTCTAGAAGCCCTAACAACAGGCCAACCATGAATGAGTTAGTGAATGAGCTAAAGGAGTGTTTGGCAACAGAAGGAGCTAGAACCAAGCACAATGATGCTAGTACAGGAGATTCAGTTGAATTAGTTTCCCTGAATATGACAAGTGCAGAATTCTCTCCCTTGGCTAGGTAG 2658 0.4037 MKMSKCFFSSLVGCLLFAVLAQSQDQSGFISIDCGIPAKSTYIEKTTGINYISDEKFINSGVSNSITSELQSMYQQQLWNLRSFPQGTRNCYRINITSGSKYLIRANFLYGNYDGQNELPSFDLHLGPNLWETVEITNASLLLSPEIIHVPSLDYTQICLVDTGSGTPFISAIELRNLMNDTYVTQSGSLSLYLRLDLGSTSKRTYGYDIYDRLWSYNVYNPDWTQISAPISADSLVQNHYNPPAIVMSNAATPVNESAPMLVWWEPKNATDQFYVYMHFAELQVLEKNQTRSFTITLNGDLFYADLVPQYQATTTMFSKYATSGEKNQFLLKKTKHSTLPPILNAIEIYTVKEFLQSETEQEDVDAITTIKSSYGLTRNWQGDPCSPVAYIWEGLNCTYNGQNSPRITALNLSSSGLTGQIDPSISNLTMLEKLDLSNNSLSGPVPDFLSRLQNLKILNIQNNNFTGTVPTDLVEKSNKGSLSLSVGENPHLCESPPCDKKKKNNIIIPVVVSVAGVLLLVVVTATIFFTLKRRKPRGTSPIETSQQVEKVEEQNDTTLQVTNRQYSYHDVLKMTNNFSTILGKGGFGTVYLGHIAETPVAVKMLSLSSVQGYQQFQAEVKLLMRVHHRNLTSLVGYCNEETNKGLIYEYMANGNLQEYLSGKDNKSRFLTWRDRLCMALDAALGLEYLHNGCKPPIIHRDVKSSNILLNENSRAKIADFGLSKIIPTDGGTHVSTVVAGTPGYLDPEYYITNRLTEKSDVYSFGVVLFEIVTGLPVISGNHERTHISQWVSSMVAKGDIKAIVDSRLRGEFDSNSAWRAVEMAMTCVSRSPNNRPTMNELVNELKECLATEGARTKHNDASTGDSVELVSLNMTSAEFSPLAR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2587g00003 885 ProSiteProfiles Protein kinase domain profile. 577 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2587g00003 885 Gene3D Transferase(Phosphotransferase) domain 1 652 871 - -
Pral2587g00003 885 SUPERFAMILY L domain-like 371 475 - -
Pral2587g00003 885 Gene3D Ribonuclease Inhibitor 365 486 IPR032675 -
Pral2587g00003 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Pral2587g00003 885 Pfam Protein tyrosine and serine/threonine kinase 580 846 IPR001245 GO:0004672|GO:0006468
Pral2587g00003 885 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Pral2587g00003 885 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 859 - -
Pral2587g00003 885 PANTHER OS07G0107800 PROTEIN-RELATED 30 850 - -
Pral2587g00003 885 FunFam Leucine-rich repeat receptor-like protein kinase 550 651 - -
Pral2587g00003 885 Gene3D Phosphorylase Kinase; domain 1 559 651 - -
Pral2587g00003 885 SMART serkin_6 577 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2587g00003 885 SUPERFAMILY Protein kinase-like (PK-like) 556 846 IPR011009 -
Pral2587g00003 885 FunFam Leucine-rich repeat receptor-like kinase 363 496 - -
Pral2587g00003 885 Pfam Malectin-like domain 32 352 IPR024788 -
Pral2587g00003 885 CDD STKc_IRAK 583 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2587g00003 Pral-Chr2587 49554 53761 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2587g00003 1 885 Receptor kinase-like Gene Family AT1G51800 49.780 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2587g00003 Malectin_like 1.3e-114 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2587g00003 - - qsa:O6P43_027684 1139.02