Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2587g00001 ATGTCAACTATTTGCCCAAGTCGAACATTGCAGGCCATGCTTGGTTCCAGTGACCCTTCTAGTTCACCATTTCTTGTTCATTCTCAGAACCAATCAGGTTGGCTAATCCGATCTTGCTCATCTGACTGCAATCACATCTTCATATTTCTTGCAAATGAATCATTGAATCTTACCCTTTTTGCAGGATTTATCAGTATTGATTGTGGATTTGTGGATAAACCAAGCTACACAGATGAAACTACTTCCATCTATTATACTTCAGACTCCAACATCATATCCACTGGACTTAGTCACAGCATATCATCTAAACATAAGACGCAGACCCTTAAAAAGCAGTTCCGGAATGTTAGAAGCTTCCCAGAAGGAAGCAGGAACTGCTATACTCTTGCTGCTCCTCAAGGAAGGAGCAGAAAGTTCTTAGTGAGAGCCATGTTCATGTATGGAAACTATGACGGTGAAAACTCTCTCCCCAAATTTGATATCTATCTGGGAGCTAAATGGTGGGACTCCCTGACGTTTCAGAATGCATCTGAGATAGTAACCAAAGAAATAATTTATGCTGCTTCATCAGATTACGTTCATGTGTGCCTTTTTAACACCAACAATGGTAAACCTTTCATATCAGTGTTGGAGCTAAGAGTTCTTGACAGCAATGCCTATCTCGCCAGCTCCCTGCAGCTCTTGGCTCGGTATGATATAGGGCTGCAGGATGGGGAATCAGTCAGGTACCCAGATGACATCTATGATCGAATATGGACACCTTTTAACTCAAAAGACTGGAGACAGATAAATACATCACTCCCTGTAGACGAAGGATCATCATCATCCGACTTCATAACTTACCCACCTTCCACTGTCATGAGAACAGCAGCAACTCCAGCAAATGTCAGCAACAAATTGGAATTTCGCTTCCAGCTTGGGCACAATCCCTCCATATACAACGCATACTTGTACTTTGCTGAAATCCAGAAACTCCAAGCAAACCAAATCAGAGAATTTGACATATTCTTGAATGGAGACCTTTTAATGGCTGATATCAGTCCTTTGTACCTTAAAACCTTGTATTATAGTAGGGGTATGACAACTCAACGTTGGCTTGATGTTTGGATCAATACAACGGATAGATCTACTCTTCCTCCTCTTTTCAATGCCATTGAGATATATATGACTAAGGACCTCTCTCAGTCACAAACACAGCAAACAGATGTTGATGCAATCACGAACATCAAATTATCTTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACGGGCATACTTGTGGGACGGTCTTAACTGCAGCTATGATGGATCTGGCCTCCCAAGGATCACCTCCTTGAACTTATCGTCTGGAGGATTAACTGGAAACATAGCTCCAGACATATCCAATTTGAAGGCGATCGAGTACTTGGATTTGTCAAACAACAATTTAGTTGGAGATGTACCTGGTTTCCTCTCTCAGCTGCAGTTCTTGAGGGTTCTAGAACTGGAAGGCAATCAGCTATCAGGAACAATTCCTACAAAACTTATTGAGAAGTCAAAGAATGGATCACTTAAACTCAGTTTTGGCGGAAATCCAAATCTTTGCTCTTCAGAAGACTCATGTAAGAGTAGGAAGGCAAGGTTCGTCATTCCATTAGTGTCATCACTAGCTGGAGCCTTCATGCTGCTGGCAGCCACAATTACTTTCTGCATCTCCAGAAGGAAAAAAATAGTTCCCATCTATCCAGTGAAGCTGAGTGCTTATTCCAGAATAAACAAAGAGCTAGGGCTGAAGAAACAAGAATTCACATATGCTGAAGTTTGTAGCATTACCAACAACTTTGAAAACGTTTTGGGAAAAGGAGCATTTGGAACAGTGTACCACGGCATCATAAATAACACTCAGGTTGCTGTCAAAATGCTCTCTCCCTCAGGTCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTGCTAAAGTTCACCATAAACACTTGACTTCTCTGATAGGATATTGTGACGATGGCACCAACGTTGCCCTCATCTATGAGTATATGGCTAATGGCGACTTAGCCAAGCATTTATCAGAGAAAAATGTAAATATCTTGAACTGGAAACAACGGCTACAAATTGCAGTGGATGCCGCAGAAGGCTTGGAGTATCTGCATACGGGTTGTAAGCCACCGATTGTTCACAGAGATGTTAAGCCCAAAAACATCTTACTGAATGAATTTTTTCGTGGAAAAATAGCTGATTTTGGATTGTCAAAAATCTTTCGTGATGAAGATGATACGCATATATTTACTGTGATAGCTGGCACCCCAGGATATCTTGACCCCGAGTACAATATGTCAAACAAGTTGAACGAAAAAAGTGATGTTTATAGCTTTGGGATTGTTCTTCTTGAGATAATCACAGGACAACCTGCCATAGCCAAGACTGAAGAAAAACCTCACATAGTTCAGTGGGTTAATCTCATGCTAGCTGAAAGCAAGATTGTTGATATGGTGGATTCAAGATTACAGGGAAACTTTGATATTGATTCGGCAACAAAAGCACTGGAAACTGCAATGGCTTGTGTGGCACCTTCTTCCTTAAACAGGCCAACAATGAGTCACGTAGTGATGGAATTGAGACAATGTTTGGCTATGGAGATAGCCCGTGGAATTCAAAGTCAAATTGATTACTCATTTGGTCGAATCAGTGGAGAGAGTTCTTTGGCTAGATAG 2718 0.4143 MSTICPSRTLQAMLGSSDPSSSPFLVHSQNQSGWLIRSCSSDCNHIFIFLANESLNLTLFAGFISIDCGFVDKPSYTDETTSIYYTSDSNIISTGLSHSISSKHKTQTLKKQFRNVRSFPEGSRNCYTLAAPQGRSRKFLVRAMFMYGNYDGENSLPKFDIYLGAKWWDSLTFQNASEIVTKEIIYAASSDYVHVCLFNTNNGKPFISVLELRVLDSNAYLASSLQLLARYDIGLQDGESVRYPDDIYDRIWTPFNSKDWRQINTSLPVDEGSSSSDFITYPPSTVMRTAATPANVSNKLEFRFQLGHNPSIYNAYLYFAEIQKLQANQIREFDIFLNGDLLMADISPLYLKTLYYSRGMTTQRWLDVWINTTDRSTLPPLFNAIEIYMTKDLSQSQTQQTDVDAITNIKLSYGIKRNWQGDPCTPRAYLWDGLNCSYDGSGLPRITSLNLSSGGLTGNIAPDISNLKAIEYLDLSNNNLVGDVPGFLSQLQFLRVLELEGNQLSGTIPTKLIEKSKNGSLKLSFGGNPNLCSSEDSCKSRKARFVIPLVSSLAGAFMLLAATITFCISRRKKIVPIYPVKLSAYSRINKELGLKKQEFTYAEVCSITNNFENVLGKGAFGTVYHGIINNTQVAVKMLSPSGQGYLQFQAEAKLAKVHHKHLTSLIGYCDDGTNVALIYEYMANGDLAKHLSEKNVNILNWKQRLQIAVDAAEGLEYLHTGCKPPIVHRDVKPKNILLNEFFRGKIADFGLSKIFRDEDDTHIFTVIAGTPGYLDPEYNMSNKLNEKSDVYSFGIVLLEIITGQPAIAKTEEKPHIVQWVNLMLAESKIVDMVDSRLQGNFDIDSATKALETAMACVAPSSLNRPTMSHVVMELRQCLAMEIARGIQSQIDYSFGRISGESSLAR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2587g00001 905 Gene3D Ribonuclease Inhibitor 403 525 IPR032675 -
Pral2587g00001 905 Pfam Malectin-like domain 66 389 IPR024788 -
Pral2587g00001 905 Pfam Protein tyrosine and serine/threonine kinase 611 874 IPR001245 GO:0004672|GO:0006468
Pral2587g00001 905 SUPERFAMILY L domain-like 405 512 - -
Pral2587g00001 905 CDD STKc_IRAK 615 874 - -
Pral2587g00001 905 Gene3D Transferase(Phosphotransferase) domain 1 682 892 - -
Pral2587g00001 905 Pfam Leucine rich repeat 444 504 IPR001611 GO:0005515
Pral2587g00001 905 SUPERFAMILY Protein kinase-like (PK-like) 595 874 IPR011009 -
Pral2587g00001 905 FunFam Leucine-rich repeat receptor-like kinase 401 534 - -
Pral2587g00001 905 Gene3D Phosphorylase Kinase; domain 1 591 681 - -
Pral2587g00001 905 Gene3D - 232 391 - -
Pral2587g00001 905 PANTHER OS07G0107800 PROTEIN-RELATED 64 878 - -
Pral2587g00001 905 ProSitePatterns Protein kinases ATP-binding region signature. 615 636 IPR017441 GO:0005524
Pral2587g00001 905 ProSiteProfiles Protein kinase domain profile. 609 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2587g00001 905 SMART serkin_6 609 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2587g00001 905 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 682 886 - -
Pral2587g00001 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2587g00001 Pral-Chr2587 5696 10926 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2587g00001 61 885 Receptor kinase-like Gene Family AT2G19210 48.452 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2587g00001 Malectin_like 7.2e-103 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2587g00001 - - psat:127087401 1119.76